Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0500 ATGGGGAATGTGAATGCAAGAGAAGATGGGAATGGAAGTCCCTCAGGGACTGAAGAAGAAGGTGGAGGCAGTGGCAGTGTACAGGAGGCCATTTCTGCATCGAATAATGTGTCTTCTGAGTTGATGGGTCAATCGCCACCTACAAGCCCTAGAGCCATCCAATCTCCATTGATGTTCGCTCCGCAAGTTCCAGTGGTTCCACTTCAAAGACCTGACGAGATGCAAGCCCCAAGTCATTCTTGGATGCAAGCTTCTTCTGCATATGAAGATATGTGCAATGAACAAGGAATTCCAACGATGATTACTTGGAGCTATGATGGGAAAGAAGTAGCTGTGGAGGGATCATGGGATAATTGGAAAACAAGAATGCCCATGCAAAGATCCGGGAAAGACTTCACTTTAATGAAGGTACTGCCGTCTGGTGTTTACCAGTACAGGTTCCTAGTTGATGGACAGTGGAGGTATGCTCCTGACCTGCCCTGGGCTCAAGATGATGCTGGCAATGCCTACAACATTCTAGACTTACAGGATTATGTTCCTGAAGACATTGGAAGTATTTCTGGTTTTGAACCTCCTCAGTCACCAGAATCAAGTTATAGCAACTTACAACTTGGTTCTGAAGATTATGCAAAGGAACCACCCTTGGTTCCCCCACACCTGCAAATGACGCTGCTTAATGTGCCTGCTACCAATATGGAAATTCCAGCTCCTTTGTCAAGACCTCAACATGTAGTGCTCAATCATCTTTACATGCAGAAGGGAAAGACAAGCCCTTCGGTGGTCGCACTTGGTACAACTCATCGGTTTTTGGCCAAATATATCACCGTGGTGCTGTACAAGTCGTTGCAGAGGTAA 855 0.462 MGNVNAREDGNGSPSGTEEEGGGSGSVQEAISASNNVSSELMGQSPPTSPRAIQSPLMFAPQVPVVPLQRPDEMQAPSHSWMQASSAYEDMCNEQGIPTMITWSYDGKEVAVEGSWDNWKTRMPMQRSGKDFTLMKVLPSGVYQYRFLVDGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIGSISGFEPPQSPESSYSNLQLGSEDYAKEPPLVPPHLQMTLLNVPATNMEIPAPLSRPQHVVLNHLYMQKGKTSPSVVALGTTHRFLAKYITVVLYKSLQR 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0500 284 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 284 IPR043554 -
Lele36g0500 284 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 210 280 IPR006828 GO:0005515
Lele36g0500 284 CDD E_set_AMPKbeta_like_N 98 174 - -
Lele36g0500 284 Pfam Glycogen recognition site of AMP-activated protein kinase 97 176 IPR032640 -
Lele36g0500 284 SUPERFAMILY E set domains 96 182 IPR014756 -
Lele36g0500 284 MobiDBLite consensus disorder prediction 1 54 - -
Lele36g0500 284 Gene3D Immunoglobulins 90 179 IPR013783 -
Lele36g0500 284 MobiDBLite consensus disorder prediction 1 52 - -
Lele36g0500 284 SMART AMPKBI_2 192 282 IPR006828 GO:0005515
Lele36g0500 284 Gene3D - 187 282 - -
Lele36g0500 284 SUPERFAMILY AMPKBI-like 179 281 IPR037256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0500 Lele-ChrLele36 3145356 3148112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0500 87 177 Protein tyrosine phosphatase (PTP) family AT3G01510 30.928 1.98e-06 47.0