Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0490 ATGGGTGATCATGAGGTTCAACAAAAACCAGAACAAGAACCCTTTCTCTCAGACTCAAGAAATCGTACTTCTAATCTCAATGAGAAGATGAATGACCTACAGAGAAGAAGGCGTACCCGGCAAGGAGATGGTTCTTCTGAGAATGGTGATATCAACAACGAAGAAGAAGAAAATCTGATTCATCAAACTCCACCGTTATCAGACATAGATTCTGATCATTTCAAATCCAAGAAACTCGTCCTAATGTTCTTAACTGCCTACCTAGGATTAGGAACCCTATCCTTCTTCCTCGTAAGGCGTCAAATAAAGGGCATAGAGACCAATGGCTTCCTTGATGCCCTTTACTTCTGTGTTGTCACTATGACCACAGTAGGGTATGGAGACCTTGTTCCCAACAGCACATTGGCCAAACTTCTTGCATGTGTCTATGTCTTCACAGGCATGGCTCTTGTAGGCATGATCATGAGCAAAGCAGCCGATCACTTTCTTGAGAAGCAAGAAATCCTACTCGTTCGAGCCATCCACGTGGGCGAAATTGTGAGTCCTTCGGAACTTCTTGAAGAGGTTGAGGCACACAAAGTGAAGTACAAGTTCTTGATGACTTCATCTGTTCTTGTAGTTCTCATGATTGTAGGGACTGTTTTTCTGAGTTTGGTGGAGAATCTAGAGCTTGTAGATGCCTTTTATTGTGTTTGTTCTACGGTTACTACTTTAGGGTATGGTGACAAGAGCTTCTCTACAAGTGTTGGACGTGGTTTTGCTGTGTTTTGGATATTGAGTAGCACCATTTGCTTGGCTCAGTTTTTCTACTATCTAGCTGAACTTTACACTGAAGGTAGACAAAAATCACTGGTCAGAACTGTTCTTTCCAGAAAACTCTTGCGCTCAGATCTTGAGGCAGCAGATCTTGATAATGACAATGTTGTTAGCGCTGCAGAGTTCATTGTGTACAAGTTGAAGGAAATGGGAAGGATCAACCAACAAGATATTTCTATCGTGATGGAGGCTTTTAGGAAACTTGACTATGATAAATCAGGAACTTTGACTGAAGCTGATCTCAAACCTGCTGGGTCATCTTGA 1080 0.4213 MGDHEVQQKPEQEPFLSDSRNRTSNLNEKMNDLQRRRRTRQGDGSSENGDINNEEEENLIHQTPPLSDIDSDHFKSKKLVLMFLTAYLGLGTLSFFLVRRQIKGIETNGFLDALYFCVVTMTTVGYGDLVPNSTLAKLLACVYVFTGMALVGMIMSKAADHFLEKQEILLVRAIHVGEIVSPSELLEEVEAHKVKYKFLMTSSVLVVLMIVGTVFLSLVENLELVDAFYCVCSTVTTLGYGDKSFSTSVGRGFAVFWILSSTICLAQFFYYLAELYTEGRQKSLVRTVLSRKLLRSDLEAADLDNDNVVSAAEFIVYKLKEMGRINQQDISIVMEAFRKLDYDKSGTLTEADLKPAGSS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0490 359 ProSitePatterns EF-hand calcium-binding domain. 302 314 IPR018247 -
Lele36g0490 359 Gene3D - 287 358 - -
Lele36g0490 359 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 54 331 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele36g0490 359 Gene3D - 179 286 - -
Lele36g0490 359 SUPERFAMILY EF-hand 272 354 IPR011992 -
Lele36g0490 359 SUPERFAMILY Voltage-gated potassium channels 78 164 - -
Lele36g0490 359 Gene3D - 72 169 - -
Lele36g0490 359 MobiDBLite consensus disorder prediction 12 28 - -
Lele36g0490 359 ProSitePatterns EF-hand calcium-binding domain. 341 353 IPR018247 -
Lele36g0490 359 SUPERFAMILY Voltage-gated potassium channels 194 290 - -
Lele36g0490 359 Coils Coil 16 36 - -
Lele36g0490 359 MobiDBLite consensus disorder prediction 1 66 - -
Lele36g0490 359 MobiDBLite consensus disorder prediction 29 44 - -
Lele36g0490 359 Pfam Ion channel 204 276 IPR013099 -
Lele36g0490 359 Pfam Ion channel 83 160 IPR013099 -
Lele36g0490 359 PRINTS Two pore domain K+ channel signature 119 147 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele36g0490 359 PRINTS Two pore domain K+ channel signature 236 245 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0490 Lele-ChrLele36 3081080 3083320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0490 48 353 Ion Channels AT5G55630 58.170 1.97e-129 373