Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0478 ATGCAAACAACTCGGAAACACCCTACTTCAGTTGGTTTCCATCTGTATCACCAGCCGATGCAAGACACCGGCACAACCCACCATGTATCTCGTTTCCAGATTTTGCCAAGCAATTCATGCAATGAAATCCTTGATGATAGCAGCCAGGGAACCGCAGTTTCTTTTGAAACCTGCAACCAGCAATACTTTACTCTTGAATCATCCCTACCACCACCACCCCCTGTTCCCATAGCCTGTGATTCCTCTTCCTTTGCTAGCAATTCATCTAATAGGAGTCCGTTTTCACCACAAGGTTCTCAGACTCAATCATCCCTTTCAGATCAGCACCAGTCCATTGATAACACCTATGAATCACCAATCAGTGGCTGCTCTAGTGTTGATGGTGGCAATGAATGGAAGCACATGCTCAAGGAATTGGAGAACGAACTGTTGGGACCTGAGTCAGATACTGTTGACAGTTGCGATTGCTGCATCGAGGGAGCCCACCAGCAAACATCTCCGATGTCTGGATGCAATTGGGATCAGATTGGAGAAATGATTCCTCAGCTTGACCTTAGAGATGTCCTCATTCGTTGTGCACAATTCGTGTCCAATGGAGATTTTCAAACAGCAACAGGATTGATGGATAAAGTATTGGTGAAGATGGTGTCAGTTTCTGGGGATCCACTTCAGAGGCTGGGAGCTTACATGTTGGAGGGTCTTAGAGCGAGAATGGTATCAACTGGGAGTGTCATCTACAAATCTTTGAGGTGTGAACAAGAACAACCTCCAACAAGCAAAGAACTGATGAGTTACATGGGCATCCTCTATAGGATTTGCCCATATTGGCAGTTTGCTTACACATCTGCAAATGCTGTCATCCTAGAAGCAATGCAAAATGAATCCAGAATTCATATAATTGACTTCCAAATTGCACAGGGCACCCAGTGGAAGTTACTAATTCAGGCTCTTGCACAGAGGCCTGGTGGGCCACCGAACATTCGTGTAACCGGTGTTGATGACTCCCAATCATTCCATGCTCGAGGTGGAGGGCTTCATATTGTAGGACAACATTTGGCAAATCATGCCAATTCTCTTGGAGTGCCATTTGAGTTCCACAGTGCTGCCATGTCTGGCTGTGAGGTTCAACTCGAGAACCTAGGAATTCGACCCGGGGAAGCCGTGGCTGTGAATTTTCCTTATGTTCTGCACCACATGCCTGATGAGAGTGTTAGCACAGAGAACCATAGAGACAGGTTATTGAGATTGGTCAAGAGCTTGTCACCCAAAGTTATGACCCTTGTTGAGCAGGAATCCAACACCAACACTTCTCCATTTCTCCAAAGGTTTGTTGAGACACTAAGTTACTATACAGCCATGTTTGAATCAATCGATGCTGCGAGTTCAAGCAGAGATGATAAGGAGCGGATTAGTGCAGAACAGCACTGTGTGGCTCGAGATATTGTCAACATGATAGCTTGTGAGGAAAGAGAGAGGGTAGAGAGGCATGAACTTCTAGGAAAGTGGAGGGCAAGACTTGCCATGGCTGGTTTCAAACAATGCCCGCTGAGTGCCTCGACGACAACTGCAGTCAGAAATTTGTTGAAGGGTTTCAAAGAAAAGTACAGGCTTGAGTACAGAGATGATGCTCTCTATCTTTTTTGGCTGAACAGAGCTATGTCCACCTCTTCCGCTTGGTGGTGA 1683 0.4605 MQTTRKHPTSVGFHLYHQPMQDTGTTHHVSRFQILPSNSCNEILDDSSQGTAVSFETCNQQYFTLESSLPPPPPVPIACDSSSFASNSSNRSPFSPQGSQTQSSLSDQHQSIDNTYESPISGCSSVDGGNEWKHMLKELENELLGPESDTVDSCDCCIEGAHQQTSPMSGCNWDQIGEMIPQLDLRDVLIRCAQFVSNGDFQTATGLMDKVLVKMVSVSGDPLQRLGAYMLEGLRARMVSTGSVIYKSLRCEQEQPPTSKELMSYMGILYRICPYWQFAYTSANAVILEAMQNESRIHIIDFQIAQGTQWKLLIQALAQRPGGPPNIRVTGVDDSQSFHARGGGLHIVGQHLANHANSLGVPFEFHSAAMSGCEVQLENLGIRPGEAVAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVMTLVEQESNTNTSPFLQRFVETLSYYTAMFESIDAASSSRDDKERISAEQHCVARDIVNMIACEERERVERHELLGKWRARLAMAGFKQCPLSASTTTAVRNLLKGFKEKYRLEYRDDALYLFWLNRAMSTSSAWW 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0478 560 MobiDBLite consensus disorder prediction 80 122 - -
Lele36g0478 560 Pfam GRAS domain family 185 559 IPR005202 -
Lele36g0478 560 ProSiteProfiles GRAS family profile. 176 560 IPR005202 -
Lele36g0478 560 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 119 548 IPR005202 -
Lele36g0478 560 MobiDBLite consensus disorder prediction 74 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0478 Lele-ChrLele36 2981474 2983156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0478 1 559 GRAS Transcription Factor Family AT4G17230 57.368 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele36g0478 GRAS 1.1e-124 CL0063