Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0439 ATGGGGAAATCCGTGGGTAGAAAAAAGAAGGGTGGTTCAAATCAAGTTGTTCCTGATAACTCAGCTCCAAGTGCTAATGGTGGTGTGGATTTAGACTCTTCAATCTTTTTGAAAAGAGCCCTTGAGATCAAGGAAGAAGGGAATAAGAGGTTCCAAAGCAAGGACTATGCTGGCGCTCTTGAGCAGTATGAGAATGCTCTTCGACTAACACCCAAGACCCACCCTGAGAGAGCGGTCTTTCATAGCAATAGAGCGGCATGCTTGATGCAAATCAAGCCCATAGATTACGAAACTGTGATTGCTGAATGCACCATGGCATTGCAGGTCCAGCCCCAATATGTCCGGGCACTTCTTCGGAGGGCTCGGGCATTCGAGGCTATTGGGAAGTATGAAATGGCCATGCAGGATGTACAAGGCTTACTGGCAGCTGACCCTAATAATCGGGATGCTCTGGAGATTGCCCAGAGACTGAGGACAGCAATAGGTCCTCGCCAGGAATCCCAGCAGGATCTTCAGAGTCGACCCTCCCCTGCTGCTCTCGGCGCTTCTGCAGTCCGTGGTGCCCCTATTGCTGGTTTAGGGCCATGTTTACCAGCCAGGCCAGTATCAAAGAAAGGGGCAAACTCGGCAGGTGGATCAGTTGCTCCTGCTAACAGCAAGTCAGAGAAGTCCCAACCAACTTTAGTTACTGAAAATGGTCCCGAGTCCAAGTCACAAATGCCAAAAGTTGTGTTAAAGCCTTCAAATGCTTCAGCAAGATCTCTGAACCCAAGAAAAGAGAACCACGATGAACTGTCATCGCATTCATCAATTACACACGGACGTCATTCAGAATTTGCCGTTCAGTGGAGGCCATTGAAACTTGTTTATGATCATGACATTAGGCTTGGCCGGATGCCAATGAATTGCAATTTTAGAACACTAAGAGATATAGTGAGTAAAAGATTTCCATCATCAAAGTCCGTTCTGATCAAGTATAAGGATAGTGATGGTGATTTGGTGACAATAACCTCTACTGATGAACTTAGACTGGCAGAATCTAGTGCTGATAGCCATCTTATAAAAGAGCCTGATGCAGATAGAAGTGATTCCGTTGGCATGTTGAGGCTTCATATTGTTGAAGTTAGTCCTGAGCAGGAGCCTCCTTTACCAGAAGAAGAGGACGTAAAACCTGTTGAGAATGAATGCATCAAGGGAGATGAGAGTGGGTCCCATACTTGCCAAAGTGAATCTGTCCCAGAGGCTTTGGAGACTGAGGTCGATAAGACGGGGAAAGAAGCTCCCAAGGAGAAACCAGCAGCTACAGAAGATGCCGAATGCAAGGAAGTGGAGATGGATGATTGGTTGTTTGAATTTGCTCAGCTTTTCCGCTCTCATGTGGGCATTGATCCAGATGCTCATATTGACTTGCATGAGCTGGGGATGGAGCTTTGTTCAGAGGCACTTGAGGAAACAGTAACTAGTGAGGAAGCTCAAGATCTCTTTGACAAAGCTGCTTCAAAGTTCCAGGAGGTAGCTGCTCTGGCATTCTTTAATTGGGGAAACATTCAAATGTGTGCAGCTAGAAAACGAATTCCCTTGGATGAGTCAGGTGAGAAGGAAAAAGTCGCAGAACAGCTTCAAGTGGCTTACGACTGGGTCAAGGAAAAATATTCATTGGCAAGAAAGAAGTACGAGGAAGCCCTTTTAATAAAACCAGACTTCTATGAGGGATTGCTAGCTCTGGGGCAGCAACAATTCGAAATGGCTAAACTTAATTGGTCATTTGCACTTGCTAAGAAGATGGATTTATCAGACTGGGGTTCTTCAGAGACACTTCGACTTTTTGACAGTGCAGAGGAGAAGATGAAAGCTGCAACTGATATGTGGGAAAAGCTGGAGGAACAGAGGGCAAATGAGCTAAAAGATCCTAGCGCAAGCAAGAAAGAGGAACTACTGAGAAGAAGGAAAAAAAAGGGAGGCGCTACTGAAGGTGAAACCTCTGCAGTCGGTGGTCAAGGTGAAATATCTGCAGAAGAAGCTGCAGAGCAAGCAGCTGTCATGAGATCACAGATTCACCTCTTCTGGGGCAATATGCTATTTGAAAGATCCCAAGTTGAATGCAAATTAGGTATGGGTGGTTGGAAGAATAATCTGGATGCATCTGTGGAGCGTTTTAAACTTGCAGGAGCTTCTGAGGCTGACATTTCCTTGGTTCTGAAGAATCATTGCTCTAATGGGGATGCAAAGGAAGGAGATGAGAAAAAGATTCAGAACCCCCAACCCGGCAAGACTGGTGAAACTGAGAAGACCAGTGAGACCAGTTAG 2307 0.459 MGKSVGRKKKGGSNQVVPDNSAPSANGGVDLDSSIFLKRALEIKEEGNKRFQSKDYAGALEQYENALRLTPKTHPERAVFHSNRAACLMQIKPIDYETVIAECTMALQVQPQYVRALLRRARAFEAIGKYEMAMQDVQGLLAADPNNRDALEIAQRLRTAIGPRQESQQDLQSRPSPAALGASAVRGAPIAGLGPCLPARPVSKKGANSAGGSVAPANSKSEKSQPTLVTENGPESKSQMPKVVLKPSNASARSLNPRKENHDELSSHSSITHGRHSEFAVQWRPLKLVYDHDIRLGRMPMNCNFRTLRDIVSKRFPSSKSVLIKYKDSDGDLVTITSTDELRLAESSADSHLIKEPDADRSDSVGMLRLHIVEVSPEQEPPLPEEEDVKPVENECIKGDESGSHTCQSESVPEALETEVDKTGKEAPKEKPAATEDAECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFDKAASKFQEVAALAFFNWGNIQMCAARKRIPLDESGEKEKVAEQLQVAYDWVKEKYSLARKKYEEALLIKPDFYEGLLALGQQQFEMAKLNWSFALAKKMDLSDWGSSETLRLFDSAEEKMKAATDMWEKLEEQRANELKDPSASKKEELLRRRKKKGGATEGETSAVGGQGEISAEEAAEQAAVMRSQIHLFWGNMLFERSQVECKLGMGGWKNNLDASVERFKLAGASEADISLVLKNHCSNGDAKEGDEKKIQNPQPGKTGETEKTSETS 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0439 768 CDD PB1 286 355 - -
Lele36g0439 768 SMART tpr_5 40 73 IPR019734 GO:0005515
Lele36g0439 768 SMART tpr_5 114 147 IPR019734 GO:0005515
Lele36g0439 768 SMART tpr_5 78 113 IPR019734 GO:0005515
Lele36g0439 768 MobiDBLite consensus disorder prediction 212 255 - -
Lele36g0439 768 Coils Coil 609 629 - -
Lele36g0439 768 MobiDBLite consensus disorder prediction 738 768 - -
Lele36g0439 768 MobiDBLite consensus disorder prediction 629 669 - -
Lele36g0439 768 Gene3D - 285 355 - -
Lele36g0439 768 Pfam PB1 domain 283 374 IPR000270 GO:0005515
Lele36g0439 768 SUPERFAMILY TPR-like 38 171 IPR011990 GO:0005515
Lele36g0439 768 Gene3D Tetratricopeptide repeat domain 37 166 IPR011990 GO:0005515
Lele36g0439 768 MobiDBLite consensus disorder prediction 415 439 - -
Lele36g0439 768 MobiDBLite consensus disorder prediction 1 29 - -
Lele36g0439 768 SUPERFAMILY CAD & PB1 domains 281 353 - -
Lele36g0439 768 ProSiteProfiles TPR repeat profile. 114 147 IPR019734 GO:0005515
Lele36g0439 768 MobiDBLite consensus disorder prediction 14 28 - -
Lele36g0439 768 PANTHER PROTEIN CLMP1 1 753 IPR044517 -
Lele36g0439 768 MobiDBLite consensus disorder prediction 203 274 - -
Lele36g0439 768 MobiDBLite consensus disorder prediction 256 271 - -
Lele36g0439 768 SMART PB1_new 283 375 IPR000270 GO:0005515
Lele36g0439 768 ProSiteProfiles PB1 domain profile. 283 375 IPR000270 GO:0005515
Lele36g0439 768 MobiDBLite consensus disorder prediction 399 439 - -
Lele36g0439 768 MobiDBLite consensus disorder prediction 739 753 - -
Lele36g0439 768 MobiDBLite consensus disorder prediction 629 656 - -
Lele36g0439 768 ProSiteProfiles TPR repeat profile. 40 73 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0439 Lele-ChrLele36 2744860 2747166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0439 30 158 Calmodulin-binding Proteins AT3G25230 29.286 5.21e-11 63.9