Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0436 ATGAGTCAGCTTGGGGTAATGTTGCGGGAATCCCTTGAGAGGGACCGAGAGGAAAGAACGATACTGGGATTGTTTACGGAGCAAATGGAATCTGTGAATAGGGATAATCATGACGATAGAGAGCCTCGAAGGAGACGGAGTTTAAAAGAGCGGCTAAGATTCACCGGCATGGGGTGTTGTGGGACGACCTGGGGTTTCAGTCCGACCTCCGTAAGGCACGATGAAGGAGACGAAGAAGAAGGAGACGAACGGCGGCAGCAGCAGCAGCAAAGGCTCCAAGAGACAAATCCGGGTCAAAGTTCGAGCTCGTCAGACCCGGATTGTTTGAGCCCGAACCCATCGGGGTCGGGTATGAATCTCGCGGCTGCGTTGGCGGCGGAGCGTCAATTTCGGGGGACTCAAGAACCAGAAACTCAGAGGCAAGGAACCACCGGGAACAATTTCCGGCGGGGAGGAGTTGGAGCGGCGCCGGGGACGCCGTGGAGGGTGTCGCTGATGAGGCTGCTACAGGAAGGTGAGGGAGGCGACGCGGAAGTGACGGTGACTGTGACGGAGAACGGAGGAGGGGGCAATGATACGGTATGCTGCGTGTGCATGGGAAGGAAGAAAGGAGCGGCATTTATCCCATGTGGGCATACTTTTTGCAGAGTGTGCTCCAGAGAGCTGTGGCTGAACCGAGGGAACTGTCCCCTCTGTAACCGCTCGATCCTCGAGATTCTCGACATCTTCTGA 732 0.5628 MSQLGVMLRESLERDREERTILGLFTEQMESVNRDNHDDREPRRRRSLKERLRFTGMGCCGTTWGFSPTSVRHDEGDEEEGDERRQQQQQRLQETNPGQSSSSSDPDCLSPNPSGSGMNLAAALAAERQFRGTQEPETQRQGTTGNNFRRGGVGAAPGTPWRVSLMRLLQEGEGGDAEVTVTVTENGGGGNDTVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0436 243 MobiDBLite consensus disorder prediction 71 89 - -
Lele36g0436 243 MobiDBLite consensus disorder prediction 90 117 - -
Lele36g0436 243 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 242 IPR013083 -
Lele36g0436 243 MobiDBLite consensus disorder prediction 24 50 - -
Lele36g0436 243 SMART ring_2 195 232 IPR001841 -
Lele36g0436 243 Pfam Zinc finger, C3HC4 type (RING finger) 192 237 - -
Lele36g0436 243 ProSiteProfiles Zinc finger RING-type profile. 195 233 IPR001841 -
Lele36g0436 243 CDD RING-HC 195 232 - -
Lele36g0436 243 PANTHER OS01G0917900 PROTEIN 5 243 - -
Lele36g0436 243 MobiDBLite consensus disorder prediction 31 50 - -
Lele36g0436 243 MobiDBLite consensus disorder prediction 63 157 - -
Lele36g0436 243 SUPERFAMILY RING/U-box 189 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0436 Lele-ChrLele36 2713318 2714049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0436 43 243 C3H Transcription Factor Family AT4G22250 48.815 6.81e-54 171