Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0426 ATGCGACCCTCCGACACCAGCAAGCCTCCGTACGTGGCTCGCGCGGAGAAGATCGAACAAGATAATAGGAACAACGTTAAAGTCCGTGTGAGATGGTATTATCGACCGGAAGAGTCGATTGGAGGACGCAGGCAATTCCATGGAGCGAAAGAGCTGTTCTTGTCGGACCATTATGACATCCAGAGTGCTCACACCATTGAAGGGAAGTGTATTGTACACTCTTTCAAGAACTACACTAAGCTTGAGAATGTAGGAGCAGAAGATTACTACTGTAGATTTGAATACAAGGCCGCTACCGGGGCTTTCACGCCGGACCGTGTTGCTGTGTATTGCAAATGCGAGATGCCTTATAACCCGGACGACCTCATGGTGCAATGTGAGGGGTATCATCCTGCGTGTGTGGGCATGACTATCGAAGAAGCAAAAAAGCTGGACCATTTTGTATGTTCTGAATGTTCTTCTGATGATGACATGAAAAAACCGCAAGCTACATTTTCTGCATCACCAGCATCCGATGGCAAGCTTCGATCAGAGGCTACGGAACATGTTTATGTATCTGACTCTCTTATATCGACACGTATATACACAAATGAGAAAGAAAGAAAGAAAGGTTCAAACTTACCGTTGACAGCTCTAGTAATCTTATGCATATTCAGAATCGAAGCCAAGTGCAGGCCCTGCGAGCTGGCTTTAGCTTCCTACTACGTTGACGGAGAAAACGCCAACCTCACTCGAATCAGCGACCTCTTCGGTAAGAAAATTCCAGACATCCTCAAATACAATCCCCATCTCCGAAACCCTAACACTACCACTACCCTCCCAACCCAGATTCGACTCCGCGTGCCCTACACGTGCCGCTGCTTGAACGAAGATTTCTTAGGTCACACCTTCTCATACACCATGCAACGCGGCGATACCTACGGGTCGATTGCTTATAAGACTTTCGCCGGTCTCACCGACGAGCATTGGGTGAGCAGATTCAACCTTCTTCAACCTAACCAGATACCCACCGGGACCCGGGTCAATGTTACCGTGAATTGCTCCTGCGGCGATGCTCACGTGTCCACGGATTACGGGCTGTTCTTGACGTATCCAATTCGGCCCGGCGAGAGGTTGTCGGAGGTTGCGGAGGAGAATGGTGTTACGGCCGAGTTGCTTCAGAGGTACAATCCTGGGTCCGATTTCAGCGCCGGCCTGGTGTTTGTGCCGGCTAGAGATGAAAATGGAAACTATCCACGATTGAAGTTGAGATCAGGTGATGATGATAAGGATACTGCAATGCTCTATTCAATAGGAATTTCTGGTGGAACTATTGCTTGTATAGTTGTTGGAAGCATTTCTGGGACCTTACTCTTGGGACTATTGTGTTTCGGGCTATGTAGAAGAAGTAGAGTGGAAGACTCATCCCTTTTCACAAATCCACTATCAGTTGAAGATAAGTATTGTTCTGGAAGCTGCTCAGAGAAGCTATCAGAATTGGTTGTTGGTGCTTCTCCTAGATTGACAGGTATTACAGTGGAGAAGTCAGTGGAATTCTCATATGAGGAGCTTGCTAAAGCTACTAATGGCTTTAGTATGGCTAATAAGATTGGACAAGGAGGCTTTGGGTCTGTTTACTATGCAGAACTTCGAAATGAGAAAGTGGCGATTAAGAAGATGGATATGCAAGCATCAAAAGAATTCCTTACTGAACTGAAGGTTCTTACCCATGTCCATCACCTAAACTTGGTACGTTTGATTGGATATTGTGTTAAGAACTCCTTATTTTTGGTCTATGAGTACATTGAGAATGGAAATCTAAGCCAACATCTACATGGATCAGAGAGGGAGCCATTATCATGGTCAAGTAGAGTGCAAATAGCTTTGGATGCAGCAAGAGGACTAGCGTACATCCATGAGCAAACAGTTCCTGTCTACATCCATGGAGACATTAAATCTCCAAACATATTGATTGACAAAAACTTCCGAGTAAAGGTTGCAGATTTTGGTCAGACAAATTTGACAGAATATGGAAGTTCTTCAATGACATCACATCTTGTGGGCACTTTTGGCTATATGCCTCCAGAATATGCAAAATATGGCGACTTTTCCCTCAAAACAGATGTATATGCATTTGGAGTTGTTCTCTATGAACTCATATCCGCAAAGGAAGCTATTGTGAAGACTACAAAAGAGCTTGTGAATGAATCAAAAGGCCTAGTTACCTTGGTTTTTGAAGAAGTCCTGAATCAGCAAAACCCAGAAGAAGACCTTCGTGAACTTGTTGATCCCAGGCTCGGTGACAACTACCCTCTTGACTCAGCATATAAGATGTGTCTGTTGGCGAAAGCTTGCACACAGGAAAATCCACAAGTAAGGCCAAGCATGAGATCAATTGTAGTTGCCTTGATGATACTGTCTTCTCCAAGTGAGGACTGGGATGTGGGCTCCCTCTATGTAAACCGACCTTCCATTCATCTCGTGTCTGGAAGTTAA 2475 0.4509 MRPSDTSKPPYVARAEKIEQDNRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDIQSAHTIEGKCIVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGYHPACVGMTIEEAKKLDHFVCSECSSDDDMKKPQATFSASPASDGKLRSEATEHVYVSDSLISTRIYTNEKERKKGSNLPLTALVILCIFRIEAKCRPCELALASYYVDGENANLTRISDLFGKKIPDILKYNPHLRNPNTTTTLPTQIRLRVPYTCRCLNEDFLGHTFSYTMQRGDTYGSIAYKTFAGLTDEHWVSRFNLLQPNQIPTGTRVNVTVNCSCGDAHVSTDYGLFLTYPIRPGERLSEVAEENGVTAELLQRYNPGSDFSAGLVFVPARDENGNYPRLKLRSGDDDKDTAMLYSIGISGGTIACIVVGSISGTLLLGLLCFGLCRRSRVEDSSLFTNPLSVEDKYCSGSCSEKLSELVVGASPRLTGITVEKSVEFSYEELAKATNGFSMANKIGQGGFGSVYYAELRNEKVAIKKMDMQASKEFLTELKVLTHVHHLNLVRLIGYCVKNSLFLVYEYIENGNLSQHLHGSEREPLSWSSRVQIALDAARGLAYIHEQTVPVYIHGDIKSPNILIDKNFRVKVADFGQTNLTEYGSSSMTSHLVGTFGYMPPEYAKYGDFSLKTDVYAFGVVLYELISAKEAIVKTTKELVNESKGLVTLVFEEVLNQQNPEEDLRELVDPRLGDNYPLDSAYKMCLLAKACTQENPQVRPSMRSIVVALMILSSPSEDWDVGSLYVNRPSIHLVSGS 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0426 824 Pfam Protein tyrosine and serine/threonine kinase 526 795 IPR001245 GO:0004672|GO:0006468
Lele36g0426 824 SMART BAH_4 1 106 IPR001025 GO:0003682
Lele36g0426 824 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 168 IPR013083 -
Lele36g0426 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Lele36g0426 824 Gene3D Transferase(Phosphotransferase) domain 1 595 807 - -
Lele36g0426 824 ProSiteProfiles BAH domain profile. 1 106 IPR001025 GO:0003682
Lele36g0426 824 Gene3D - 1 102 IPR043151 -
Lele36g0426 824 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 211 810 IPR044812 GO:0019199|GO:0045087
Lele36g0426 824 SUPERFAMILY Protein kinase-like (PK-like) 505 798 IPR011009 -
Lele36g0426 824 SMART serkin_6 524 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0426 824 ProSiteProfiles Protein kinase domain profile. 524 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0426 824 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524
Lele36g0426 824 Pfam BAH domain 2 105 IPR001025 GO:0003682
Lele36g0426 824 FunFam PTI1-like tyrosine-protein kinase 3 595 810 - -
Lele36g0426 824 FunFam LysM receptor kinase 2 503 594 - -
Lele36g0426 824 SMART PHD_3 110 153 IPR001965 -
Lele36g0426 824 SUPERFAMILY FYVE/PHD zinc finger 102 156 IPR011011 -
Lele36g0426 824 Gene3D Phosphorylase Kinase; domain 1 509 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0426 Lele-ChrLele36 2620947 2632672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0426 212 823 Receptor kinase-like Gene Family AT3G21630 53.462 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele36g0426 PK_Tyr_Ser-Thr 6e-48 CL0016