Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0415 ATGTATACTGGCCTGCAACTCCTTACTGCTCATACCGGGAGCGATCAGTCTACGGTGGACGACGGAGTTTCATCGGATGCTGAAATCAAGCGAGCCAAGAGTTCCACTGAGTTGGCGCAACTAAAAGAGGAGCTTCAGCGTATGAATGCGGAAAACCTGAAGCTAAGGGACATGTTGAGCCACGTGAGCAGTAATTACTCGGCTCTGCAAATGCATCTCGTCACATTAATGCAACAGCAGCAGCAACAGATTCAACAACGTGCCCAGAGCACAGCAAATGAGGTTGTTCGATCAAAACCTGATGACAAGAGAGAAATTGTACCCATGCCGCTTCTGGAATTGGGGCCTAGTAGTAGGACAGCTGAAGTAGATAACGAGGTCTCCAATTCAACTTCCGATGAAAGAACACGATCCACCACTCCTCCTCTTAACAACAACAATGGTAAAAATGAAAGAGAAGAGAGTCCAGATGACTCGGATGTTCTGCCCCAAGGCTGGGGCACCGGTCCTAACAAGCTTCAGAAGCTGCACCCCTCACCAAACTCCGCCGACCCATCAACCAGCACCACCGCCAGCGCAGAAGCCACCATGAGAAAAGCTCGCGTCTCAGTTCGTGCCAGATCAGAAGCACCAATGATCAGTGACGGGTGTCAATGGCGAAAATACGGACAGAAAATGGCGAAGGGAAACCCTTGTCCTCGTGCTTACTATAGATGCACCATGGCGGTCGGTTGCCCAGTTCGCAAACAAGTTCAACGTTGCGCGGAGGACAGGACGATTTTGATAACCACCTATGAAGGAAGCCATAACCATCCGTTGCCACCGGCGGCGATGGCGATGGCATCAACGACGACGGCGGCTGCTAGCATGTTGCTGTCGGGTTCAATGTCGAGTGCAGACGGAATAATGAATCCGAATTTGCTGGCCAGAGCTATTCTTCCTGGTTCGTCGACAAGCATGGCTACGCTTTCGGCTTCGGCTCCGTTTCCTACCATAACATTGGACCTCACTCACAATTCAAATAGTAGTAACATGAACAATCCTATGCAGTTCCAGAGACCACCATTTCAGGTACCTAATTTCCAAGGGCAGCCTCAAGTTCCACAACCAACCGCGTCGGGTCAGCATCAGTTGGCTCAGGCATTTTCACAAGCACTTTACAATCAATCCAAGTTCTCTGGCCTTCACTTGTCTCAGGATATGGGTTCGTCGTCTTCATCTTCTTCCCAATTAGCCCACCAGCAACCTCCCAGGCCGGTGCAGCCAAGCCAACCGCCGCAGCCGTCGTTGGCAGATACCGTCAACGCGGCCACCGCGGCCATCACCGCCGACCCAAACTTCACAGCGGCGCTTGCGGCCGCCATCTCCTCCATCATTAATGGCGGCGGTGTTCCCCCGAGCAGCAACAACAACAACAGTAGCAGCGGCAATCCCAACATCACCAGTGGCACCAAAATCAGCAGTTTCTCAGGGAATCACTAA 1482 0.5202 MYTGLQLLTAHTGSDQSTVDDGVSSDAEIKRAKSSTELAQLKEELQRMNAENLKLRDMLSHVSSNYSALQMHLVTLMQQQQQQIQQRAQSTANEVVRSKPDDKREIVPMPLLELGPSSRTAEVDNEVSNSTSDERTRSTTPPLNNNNGKNEREESPDDSDVLPQGWGTGPNKLQKLHPSPNSADPSTSTTASAEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGSHNHPLPPAAMAMASTTTAAASMLLSGSMSSADGIMNPNLLARAILPGSSTSMATLSASAPFPTITLDLTHNSNSSNMNNPMQFQRPPFQVPNFQGQPQVPQPTASGQHQLAQAFSQALYNQSKFSGLHLSQDMGSSSSSSSQLAHQQPPRPVQPSQPPQPSLADTVNAATAAITADPNFTAALAAAISSIINGGGVPPSSNNNNSSSGNPNITSGTKISSFSGNH 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0415 493 MobiDBLite consensus disorder prediction 174 196 - -
Lele36g0415 493 MobiDBLite consensus disorder prediction 396 433 - -
Lele36g0415 493 SMART WRKY_cls 213 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele36g0415 493 ProSiteProfiles WRKY domain profile. 208 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele36g0415 493 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 16 474 IPR044810 GO:0003700
Lele36g0415 493 MobiDBLite consensus disorder prediction 85 207 - -
Lele36g0415 493 FunFam probable WRKY transcription factor 31 198 275 - -
Lele36g0415 493 Pfam WRKY DNA -binding domain 215 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele36g0415 493 MobiDBLite consensus disorder prediction 459 493 - -
Lele36g0415 493 MobiDBLite consensus disorder prediction 396 417 - -
Lele36g0415 493 MobiDBLite consensus disorder prediction 461 493 - -
Lele36g0415 493 SUPERFAMILY WRKY DNA-binding domain 206 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele36g0415 493 Coils Coil 24 58 - -
Lele36g0415 493 MobiDBLite consensus disorder prediction 121 149 - -
Lele36g0415 493 Gene3D WRKY domain 198 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele36g0415 493 MobiDBLite consensus disorder prediction 338 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0415 Lele-ChrLele36 2554376 2556415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0415 3 461 WRKY Transcription Factor Family AT1G62300 54.947 5.52e-138 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele36g0415 WRKY 4.9e-24 CL0274