Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0412 ATGGAGTGGACTAGGGGGCACACCATCGGCCGGGGTTCCACCGCCACTGTGTCGGTCGCAGAGTTTCGTGGGTCTGGTCGGATGTTTGCGGTGAAGTCGGTGGAGCTTCAACGGTCGGAATTCCTCAGGAGAGAACACAGTATTCTCTCTACATTGGCGTGTCCTCATGTTGTAGCGTACGAAGGTTGTGATACCACATTTGAAAATGGCGCGTTCATTTATAACTTGTTCATGGAGTATGCGCCTTACGGATCAATCGCCGACGAAATTCACGAGCGTGATGGTGGGTTGGATGAGCTTATGGTTGGACGTTATGCTCGTCAGATTCTGCTTGGGTTGAGCTATTTGCATTCCAATGGGATTGTGCATTGTGATTTGAAAGGCCAGAATGTTTTGCTCACCGATGAAGGGGCTAAAATTGCTGACTTGGGTTGTGCCCGGAGAGTTGCGGTGGCGCAGGATTATGGTGGTGGGGTGATTGCCGGCACCCCAGCGTTCATGGCACCGGAGGTGGCGCGTGGGGAGCAGCAGGGGTTCCCCGCCGACGTGTGGGCTCTTGGCTGTACTGTGCTGGAGATGATCACGGGAAAAGCACCGTGGCATGACATTTCCAACCCGGTTAGTGTCCTCTATCGAGTCGGGTTCTCCGGGGAGGTGCCGGAGATTCCGAATTTCTTGTCGGAGCAAGGGAAGGATTTTGTCACCATGTGCTTGAAAACAGATCCGAATGACAGGTGGTCAGCAGATGAGCTTCTTAAGCATGAGTTCGTTCAAGATTCGAGCACTGTCTCGAAGAAATTTGATGATTCTAGTTCAAATTCTCCAACTAGTGTGTTGTTGGATCGAGGTTTCTGGGACACGTTTGACGAGTTGCAGAAAACCCATACACAGGATCGGAACCCGAACCCGAACCCGACCCATGGTCATGTCTGTTCTTGGGATCCTCCTAGCCCCAGAAGTAGAATTCGTAGGTTGTCTTCCTCTATACCCAATTGGGAATGTGATGACAAATGGATCACAGTAAGAGACAGCAGCATGATGAGAGAGTTTTATGGGGGAGAATCTAATGAAGAAACAGAGAATTATGGACTAGACAGTTCAAATTACATTAGAGAGGACAATTATTTGGTTGTTAATACTTGTGAAGCTAGAATAGTAATTAGTATAGTTGGATTAAGCGAGTGTTGTAATATTAACTATGATTGTTGTTGCATCAGAGAATCTTTATTCGGATGTTCGAGATGCATAAAAATGGCTCCCAATAGAAATATTTTTCATGACTCGCTTTCAGCTTCCCCCTCAAATCCTACTTTTGGAGGCATAGTTTTCTTCTGCTCTGTTTCTTCAGTTGCAATCCGTTATAATTAA 1368 0.4737 MEWTRGHTIGRGSTATVSVAEFRGSGRMFAVKSVELQRSEFLRREHSILSTLACPHVVAYEGCDTTFENGAFIYNLFMEYAPYGSIADEIHERDGGLDELMVGRYARQILLGLSYLHSNGIVHCDLKGQNVLLTDEGAKIADLGCARRVAVAQDYGGGVIAGTPAFMAPEVARGEQQGFPADVWALGCTVLEMITGKAPWHDISNPVSVLYRVGFSGEVPEIPNFLSEQGKDFVTMCLKTDPNDRWSADELLKHEFVQDSSTVSKKFDDSSSNSPTSVLLDRGFWDTFDELQKTHTQDRNPNPNPTHGHVCSWDPPSPRSRIRRLSSSIPNWECDDKWITVRDSSMMREFYGGESNEETENYGLDSSNYIREDNYLVVNTCEARIVISIVGLSECCNINYDCCCIRESLFGCSRCIKMAPNRNIFHDSLSASPSNPTFGGIVFFCSVSSVAIRYN 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0412 455 Gene3D Transferase(Phosphotransferase) domain 1 2 302 - -
Lele36g0412 455 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Lele36g0412 455 MobiDBLite consensus disorder prediction 294 317 - -
Lele36g0412 455 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 295 - -
Lele36g0412 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Lele36g0412 455 ProSiteProfiles Protein kinase domain profile. 3 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0412 455 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0412 455 SUPERFAMILY Protein kinase-like (PK-like) 3 321 IPR011009 -
Lele36g0412 455 CDD STKc_MAPKKK 2 257 - -
Lele36g0412 455 SMART serkin_6 3 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0412 Lele-ChrLele36 2537430 2538797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0412 3 401 MAP Kinase Kinase Kinase AT5G55090 42.353 3.63e-103 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele36g0412 Pkinase 6.6e-52 CL0016