Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0386 ATGGATTGTTTCCCATGCTGCAATAAGCAAGAAGTTGAAACGGATCCTTTAAGCAAAAGTAACAAGGATTATGCACAATCCAGGAAATCCACATTCAAATCTTTTTTGGGGGCTCTCTCTACCAAAACAGGTAGCAGCAGACAAAGACACATTACAGCTGAGATACGAAAATATGGAACAGCGAAGAACAATGCCCGAGTCTTTACAGTTCAAGAACTAGCCTCTGCAACTGACAACTTCAGTAATGACTGTTTGATAGGTGAAGGTGGTTTTGGCAGTGTCTACAAAGGATACATACAAAGCCTTAATCAAGCTGTGGCTGTGAAGAGACTGGACAGGAATAAAATGCAAGGAAGTAGAGAATTCTTTTCAGAAGTTGTAACGTTGAGTTTGGTGAATCACCCCAACCTCGTCAAGCTCATAGGTTATTGTATTCAAGGAGATCAAAGGATGTTAGTTTATGAATTGATGGCCAATGGCAGCCTTGAAAGTCACCTTCTAGATTTAGGGCCAGACAAGGAGGGACTGGATTGGGCAACGAGAATGAAAATAGCAGAAGGAGCAGCGAGAGGAATGGAGTATCTGCATGAAGAAGCAGATCCACCGATAATATACAGAGACTTGAAGGCATCGAATATACTTTTGGATGAGAACTTCAATGCGAAGCTCTCAGATTTTGGGCTGGCGAAGATGGGACCAACGACAGAAGAAGGAAAAGATCATGTGTCGACGAGGGTGATGGGAACGTTCGGGTACTGTGCGCCCGAGTATGCTTTGACGGGTCGGGTCACTACGAAGTCTGATATTTATAGCTTCGGAGTTGTGTTAATGGAGATCATCACTGGAAGAAGAGTCTATGATACTGCTAGAGCAGAAGAAGAGCAAAACCTTATCGACTGGGCACAACCAATGCTAGAGGACAGAGAGAAGTTCACACTAATGGCAGATCCATTTCTGAAGGATAACTTCCCCGTGAAGGGACTGTTCAAAGCACTTGCAGTGGCAGCCATGTGTCTGCAAGAAGAAGCAGACACAAGACCGTTGATGAGTGATGTAGTAACAGCGCTTCAGCACATAACACAACCACCAGTAAACGGTGAAGAAGAAGATGAAAATAATAAGAACAACAAAGGACAATCTATAAAATCTGCAGGGCATGTTGAATCATTTAGGGTTGGAAGCTCACGTGTAGACAACAATCTACAAAATCAAATAAGGATTGGAAGTTCAAGTGTAAGCCATCTACATCACAGAGCTGGAAGTTCAAGTGTTGGAGGCCATCAACAACATCACAGACTTGGAAGTTCAAGTGTTGGTCATCAACAACATCACAGGGCTGGAAGTTCAGGTGTTGGAGGCCATCAACAACATCATAGGGCTGGAAGTTCAAGTGTTGGCCAATAA 1404 0.4345 MDCFPCCNKQEVETDPLSKSNKDYAQSRKSTFKSFLGALSTKTGSSRQRHITAEIRKYGTAKNNARVFTVQELASATDNFSNDCLIGEGGFGSVYKGYIQSLNQAVAVKRLDRNKMQGSREFFSEVVTLSLVNHPNLVKLIGYCIQGDQRMLVYELMANGSLESHLLDLGPDKEGLDWATRMKIAEGAARGMEYLHEEADPPIIYRDLKASNILLDENFNAKLSDFGLAKMGPTTEEGKDHVSTRVMGTFGYCAPEYALTGRVTTKSDIYSFGVVLMEIITGRRVYDTARAEEEQNLIDWAQPMLEDREKFTLMADPFLKDNFPVKGLFKALAVAAMCLQEEADTRPLMSDVVTALQHITQPPVNGEEEDENNKNNKGQSIKSAGHVESFRVGSSRVDNNLQNQIRIGSSSVSHLHHRAGSSSVGGHQQHHRLGSSSVGHQQHHRAGSSGVGGHQQHHRAGSSSVGQ 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0386 467 MobiDBLite consensus disorder prediction 361 384 - -
Lele36g0386 467 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Lele36g0386 467 PANTHER OS07G0668900 PROTEIN 3 368 - -
Lele36g0386 467 ProSiteProfiles Protein kinase domain profile. 80 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0386 467 FunFam serine/threonine-protein kinase PBS1-like 46 156 - -
Lele36g0386 467 Gene3D Transferase(Phosphotransferase) domain 1 157 385 - -
Lele36g0386 467 FunFam Serine/threonine-protein kinase PBS1 157 376 - -
Lele36g0386 467 CDD STKc_IRAK 86 359 - -
Lele36g0386 467 Pfam Protein tyrosine and serine/threonine kinase 85 299 IPR001245 GO:0004672|GO:0006468
Lele36g0386 467 MobiDBLite consensus disorder prediction 411 467 - -
Lele36g0386 467 MobiDBLite consensus disorder prediction 411 444 - -
Lele36g0386 467 Gene3D Phosphorylase Kinase; domain 1 40 156 - -
Lele36g0386 467 SMART serkin_6 80 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0386 467 SUPERFAMILY Protein kinase-like (PK-like) 62 358 IPR011009 -
Lele36g0386 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0386 Lele-ChrLele36 2335663 2339093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0386 1 363 Glycoside Hydrolase AT3G07070 56.250 4.17e-141 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele36g0386 PK_Tyr_Ser-Thr 2.9e-47 CL0016