Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0377 ATGGACCCTCAAAATTTCGTATTTTCCCCAGAAAACCCTAGACCCCTTTCGTTCTCTACTGCCCCGATCGTCTCTTCAAAACCCAATATCCCCAATGAGATTGCGCAGAAGCCTTCCCCTTCGATTCTAGTGGGCCGGTTCAAGTCTTTGCTAAAGGAACGTGAGGATGAATTCAGGGTTTCCTCCGATGATGACGTGACGGTGCGACCCCCTAGCACTGAAGAAATTGTGCAAATTTACCGGTTTTTGTTGTCGGACCTCACTTGCAACTCGAAGCCTATCATTACGGATCTTACCATTATTGCTGAGCTTCAGGTAGAGCATGCCAGAGGCATCGCCGATGCAATTTGCACTCGGATTCTTGAGGTGCCTGCAGATCAAAAGCTGCCGTCCCTCTATCTTTTGGACAGCATTGTGAAGAATGTTGGTCAGGGATATATTAGATACTTCTCTTCATGTCTGCCTGAAGTAGTGGCTCTATTGTCTCCCCAGATTTTCTGTGAGGCATACAGGCAGGGTCATCCTAAGCTGCATAATGCTATGCGCCATCTCTTTGGCACCTGGTCAACAATCTTTCCACCTTCTATCCTACGCAAGATCGAAGCTCAACTGCAGTTTTCTCAGGCAATTAATAGTCAGTCATCTACCACTGATCCCCTTAGGGCGTCTGAATCTCGTCAAGCAACTCATGGCATACACATCTATCCAAAGTACTTGCAGCAGTTGGAATATTCTACTATGGATAATGTTGGAGGTGAAAAATTGGAATCAACGGTAAATTTGGGTCTTGCGAATTTTGGCTGTGGAGCTAGGAAGATGCATCAACTTTTATCTAGCAGGCTTGGGAGATCTTCACCTTCAGAAATCGGACTTGATAGGCCTCTGTCAGCAACTATAGATGAGTATGCAGTTGACAATTCTGCTTGCTGGATAGCTGAGAGAGATCATCTTTCTAATCCTGCATTTGATTATGGAGTTGGTAAAGCAGGAAGTAGAGGTGAAGAGTTGAGTGGGTGGAAACAAAAACAGTATTCTGATGATGGTGGGAACCAGTTTCAAGTTTCTATGTCATCTAGTCTTAGTAAAGGACATCAGCGTCAAAATCTTAAAGCTTTAATAGATGCATATGGGAGTGATAAAACCTTCAATAATAAGCCTTTGTTGGTTGAACATCAGGACACAAATGGTTTAAACAAGGTTGTGTCATCATCATGGCAAAACTCTGAAGAGGAGGAATTTGATTGGGAAGATATGAGTCTAACGTTAGTAGACCATAGTAGGAACAATGATTTCTTACCATCAAGTATTGGTTTCTCTTGGGAAAAGCCTGTTATTAGTGCAGCTACTTCAGAGTGGGATCCTAGGCGTAGTTGGTCTAGTCAGTCTAGTCAGTCGCAGCTACAGCTACCACCAATGGACGATTCCTCTGTTATAGCAGGAGATAAATTTGCTTATTCAAGTGATGGTCGTGGATCACCAGTTCAGACATCTGGATACCAAAAACAGACAAACCAAATTTTAAGTTCCCGTCCACCTCTTGATGCTTGGAATATTAGAGGTCGAGCAAGCAATATTCAGATTTTCCCTGCCAGTAACATTCCAAATAGTGACATAGACCTATATGGGACTCGGGCGGCTTTGTCCAGAATGGGTTCCGCACTTGAGTCTAATGTGGAGATTCGTCCAACAGTTTTACCAGCCTCTCTTGGAATGAGGCTGCCAGTTAATGCTCATCCTGTTCGACCCCCCACCTTAAACCATACATTTCCTTTGGATAAACATAAGAGTCAGTTTGAGCCAATACATACTATCAGCACCATTGTAAATAATGGTCAAAATAATTCTTCATTTTTGGATGGTGTTGAGAACAAGGTTACAGGTTTATCAAAGCTGCATCAGCTGCCAACCCAGCTAGCTGGGCAGATTTTGTTTAACCAGAAAAACCGTGGACAAGCGCCACAACTAGTTTTTCCCTCTCAGGATGTGCAAGAGAAGTTACTTAGGTCACAAGCTCCAGCAGCTCTGCAAGTTAGTCATGAAAGCTCTTTGCTAGGACATACTGATGCTAGAAGTACAGCCATGCCAAATTTGCTTCCTGCTGTACAATTCCCTATTACAGTCCAGAACATTGCAAATAACTCTTCTCAATTACAGGGGGGAAACTTGATGTCTTTACTTCCAGTCTCCCATCCTGCTATGTCACTAACAATACCTCATTCAAATGCTGGTCCTGTTGTGTCAACCAAACAGCCAGGTGGTGCATTTTCTGGTTTAATTAACTCGCTTATGGCCCAAGGTTTGATATCAATGACTAATCAACCTCCCGAACAGGATTCTGTTGGAACTGAGTTTAATCCAGATGTTCTAAAGATTTGTCATGAGTCTGCAATCAGAGCCTTATATGGCGATCTTCCTAGACAATGCACTACTTGTGGCCTTCGATTCAAGTTCCAAGAGGAGCACAGTAGTCATATGGATTGGCATGTTACTAAGAACAGGATGTCTAAAAATCTTAAGCAGAAGCCCTCTCGCAAGTGGTTTGTGAGTGAGAGTATGTGGCTTAGTGGCGCAGAGGCATTGGGCACAGAATCAGTCCCTGGATTTTTGCCAAGTGAGATTTTAGAGGAAAAAAAAGATGATGAAGAGTTGGCTGTGCCAGCTGATGAGGATCAGAATAGATGTGCATTATGTGGTGAGCCTTTCGATGAGTTTTACAGTGATGAAGCTGAGGAATGGATGTACAGAGGAGCTGTATATATCAATGCACCCAAGGGAACCGTAGCAGGCATGGATAGGTCTCAGTTAGGCCCCCTTGTTCATGCGAAGTGCAGATCTGAGTCTATTGCTGTTCCGTCTGAAGATAATGGACCGGATGAAAGAGGCACCAATGAGGAGGAAAGTCGACGAAAACGAACGCGGAGGTAA 2925 0.4379 MDPQNFVFSPENPRPLSFSTAPIVSSKPNIPNEIAQKPSPSILVGRFKSLLKEREDEFRVSSDDDVTVRPPSTEEIVQIYRFLLSDLTCNSKPIITDLTIIAELQVEHARGIADAICTRILEVPADQKLPSLYLLDSIVKNVGQGYIRYFSSCLPEVVALLSPQIFCEAYRQGHPKLHNAMRHLFGTWSTIFPPSILRKIEAQLQFSQAINSQSSTTDPLRASESRQATHGIHIYPKYLQQLEYSTMDNVGGEKLESTVNLGLANFGCGARKMHQLLSSRLGRSSPSEIGLDRPLSATIDEYAVDNSACWIAERDHLSNPAFDYGVGKAGSRGEELSGWKQKQYSDDGGNQFQVSMSSSLSKGHQRQNLKALIDAYGSDKTFNNKPLLVEHQDTNGLNKVVSSSWQNSEEEEFDWEDMSLTLVDHSRNNDFLPSSIGFSWEKPVISAATSEWDPRRSWSSQSSQSQLQLPPMDDSSVIAGDKFAYSSDGRGSPVQTSGYQKQTNQILSSRPPLDAWNIRGRASNIQIFPASNIPNSDIDLYGTRAALSRMGSALESNVEIRPTVLPASLGMRLPVNAHPVRPPTLNHTFPLDKHKSQFEPIHTISTIVNNGQNNSSFLDGVENKVTGLSKLHQLPTQLAGQILFNQKNRGQAPQLVFPSQDVQEKLLRSQAPAALQVSHESSLLGHTDARSTAMPNLLPAVQFPITVQNIANNSSQLQGGNLMSLLPVSHPAMSLTIPHSNAGPVVSTKQPGGAFSGLINSLMAQGLISMTNQPPEQDSVGTEFNPDVLKICHESAIRALYGDLPRQCTTCGLRFKFQEEHSSHMDWHVTKNRMSKNLKQKPSRKWFVSESMWLSGAEALGTESVPGFLPSEILEEKKDDEELAVPADEDQNRCALCGEPFDEFYSDEAEEWMYRGAVYINAPKGTVAGMDRSQLGPLVHAKCRSESIAVPSEDNGPDERGTNEEESRRKRTRR 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0377 974 Pfam CID domain 88 199 IPR006569 -
Lele36g0377 974 MobiDBLite consensus disorder prediction 452 472 - -
Lele36g0377 974 CDD CID_Pcf11 80 205 - -
Lele36g0377 974 MobiDBLite consensus disorder prediction 451 505 - -
Lele36g0377 974 ProSiteProfiles CID domain profile. 72 208 IPR006569 -
Lele36g0377 974 MobiDBLite consensus disorder prediction 1 23 - -
Lele36g0377 974 SUPERFAMILY ENTH/VHS domain 72 207 IPR008942 -
Lele36g0377 974 MobiDBLite consensus disorder prediction 489 505 - -
Lele36g0377 974 MobiDBLite consensus disorder prediction 945 974 - -
Lele36g0377 974 Gene3D - 66 206 IPR008942 -
Lele36g0377 974 SMART 558neu5 75 205 IPR006569 -
Lele36g0377 974 MobiDBLite consensus disorder prediction 957 974 - -
Lele36g0377 974 FunFam polyadenylation and cleavage factor homolog 4 69 205 - -
Lele36g0377 974 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 70 956 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Lele36g0377 974 ProSitePatterns Zinc finger C2H2 type domain signature. 808 828 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0377 Lele-ChrLele36 2255343 2261985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0377 717 973 C2H2 Transcription Factor Family AT4G04885 66.537 3.69e-104 342