Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0368 ATGGTGTTGGTCTCTATTTCTTGGGTATATTTGCTTATATCAAATGATTGCTATGGAAAATTCAATGACAGAAGTACCAGATTCTCACATGCTACCTTATCTGAAGTAAACATCGTTCTCAGCCTTGTGGGGTGTGATGTTTTAAGGTCATCTGAAAGCACAACAGGAAATCATGTATCAGACACAAAACTATATCAAAATGAGAAATCCACGGCCTTGGTGAATTTGTCTTTGGAACATTCTTCCACTGATGAAGTCTTGGAAAACCTTCAAGAGGAAACCAGCAAAGAATCAAAGCTAGAATTTTCCATCGATGAGGAATCATTGATTATCAGAATGTACAACCTAGTCGGGGAAAGGTGGGCTTTAATTGCTGGGAGGATCCCAGGAAGAACAGCTGAAGAGATCGAAAAGTACTGGACTGCTACATACTCAACAAGTGAATGA 447 0.3937 MVLVSISWVYLLISNDCYGKFNDRSTRFSHATLSEVNIVLSLVGCDVLRSSESTTGNHVSDTKLYQNEKSTALVNLSLEHSSTDEVLENLQEETSKESKLEFSIDEESLIIRMYNLVGERWALIAGRIPGRTAEEIEKYWTATYSTSE 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0368 148 Gene3D - 101 143 - -
Lele36g0368 148 Pfam Myb-like DNA-binding domain 101 140 IPR001005 -
Lele36g0368 148 FunFam MYB-like transcription factor 101 143 - -
Lele36g0368 148 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 148 IPR017930 -
Lele36g0368 148 ProSiteProfiles Myb-like domain profile. 94 144 IPR001005 -
Lele36g0368 148 SUPERFAMILY Homeodomain-like 101 144 IPR009057 -
Lele36g0368 148 CDD SANT 101 140 IPR001005 -
Lele36g0368 148 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 101 144 - -
Lele36g0368 148 SMART sant 98 146 IPR001005 -
Lele36g0368 148 Coils Coil 73 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0368 Lele-ChrLele36 2194796 2198551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0368 102 142 MYB Transcription Factor Family AT5G35550 60.976 4.92e-13 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele36g0368 Myb_DNA-binding 3e-07 CL0123