LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele36g0332	ATGAGGTCAAATCCTCGCAACGACGAGGGCCCAGATGGAACCCGAGCCTCCGCTACCGCCGCCGGCATCTCCATGCCAGTCAGCCATCGCAAGAAAGGCACCGGTGTCAGAGCATGGCTCCTAATTGACGCCACTGGCCAGACACAAGTGGTGGAGGCTGGCAAGCACGCCATCATGCGCCGGACTGGCCTGCCCGCCCGAGACCTTCGGATATTGGATCCGCTTCTGTCCTATCCTTCCACGATCCTGGGGCGTGAGAGAGCGATCGTCATTAATTTGGAGCACATAAAAGCGATAATCAATGCTCATGAAGTTCTGTTGTTGAATTCGAGGGACCCATCTGTCACCCCCTTTGTTGAGGAGTTTCAGAGAAGAATTCTACATCATCATCAAGCCACTAAGGCTCAGGAGGGAAATGGCGATGATTCAAACTGGACAAAATTGTACGATTTGGAAGTGCCACAATCTAGGACTGTTAGTCCTCGTACACAAGATGAGGAAAGTAAAGGAGAAGAGAAACAATTCCAGAATAAAGACGGGATGAAGGTTCTCCCATTTGAGTTTGTAGCACTGGAGGCATGCCTTGAGGCTGCTTGTGGAGTGTTAGAAAATGAAGCAAAGACATTGGAGCAAGAGGCTCATCCTGCCTTAGATAAGTTGACTTCAAAGATTAGTACTCTCAACTTGGAACGTGTTCGTCAAATTAAGAGCCGCTTGGTTGCAATTACTGGTCGAGTTCAAAAGGTACGGGATGAGTTAGAACACTTGCTAGATGATGATGAAGACATGGCTGAGATGTATCTGACAGACAAGTTAGTTCAACAGCAGCTTGAGGATTCTTCAGCTTCATCCATGAATGATAAAGAAGACATGGAAGATCAAGAACTTCAAACTGATATGGATGGAAGGATACCTGCTGAAATATCGTTGGAAGCTGGGGGTGGTTTTGCTCGCTATGAGGATCATCAAAATGCACTTGGACGGGGCAGCCGTGGAACTCGTACTAGCACTACCCACAGTACTGTAACCAAGCAACTTGATGTAGAGGAGCTTGAGATGCTCTTGGAAGCATACTTCGTGCAAATTGATGGCACACTGAACAAACTATCCACGCTGAGGGAGTACGTGGATGACACAGAGGACTACATCAACATTATGTTGGATGACAAGCAGAACCATCTGTTGCAGATGGGAGTGATGCTGACAACGGCAACCCTAGTAGTGAGTGCTTTCGTGGTGGTGGCTGGTATTTTTGGGATGAACATTCATATTGATCTTTTTGACGCTAGCATGCATGAATTCCTCTGGACGGTTGGTGGGAGCACCGCTGGCACCGTATTCTTGTACGTGTTTGCCATTGCCTGGTGTAAACACAAACGCCTGCTGGAGTGA	1392	0.4806	MRSNPRNDEGPDGTRASATAAGISMPVSHRKKGTGVRAWLLIDATGQTQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTILGRERAIVINLEHIKAIINAHEVLLLNSRDPSVTPFVEEFQRRILHHHQATKAQEGNGDDSNWTKLYDLEVPQSRTVSPRTQDEESKGEEKQFQNKDGMKVLPFEFVALEACLEAACGVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTDKLVQQQLEDSSASSMNDKEDMEDQELQTDMDGRIPAEISLEAGGGFARYEDHQNALGRGSRGTRTSTTHSTVTKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIDLFDASMHEFLWTVGGSTAGTVFLYVFAIAWCKHKRLLE	463

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele36g0332	463	FunFam	Magnesium transporter MRS2-1	27	110	-	-
	Lele36g0332	463	CDD	Mrs2_Mfm1p-like	39	461	IPR039204	-
	Lele36g0332	463	Coils	Coil	192	212	-	-
	Lele36g0332	463	MobiDBLite	consensus disorder prediction	162	176	-	-
	Lele36g0332	463	PANTHER	RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL	25	462	IPR039204	-
	Lele36g0332	463	MobiDBLite	consensus disorder prediction	1	27	-	-
	Lele36g0332	463	Gene3D	Magnesium transport protein CorA, transmembrane region	159	394	-	-
	Lele36g0332	463	Gene3D	-	26	110	-	-
	Lele36g0332	463	MobiDBLite	consensus disorder prediction	156	176	-	-
	Lele36g0332	463	Pfam	CorA-like Mg2+ transporter protein	350	453	IPR002523	GO:0016020\|GO:0030001\|GO:0046873\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele36g0332	Lele-ChrLele36	1965046	1967644	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele36g0332	39	463	MRS2 Gene Family	AT3G19640	68.337	0.0	571