Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0328 ATGTCTCTCTCGCCGGCCGACGCTTCTGCCGCCAGGAACTCGCTCTGCGGTGAGGATGCCGATGAATTGATCTCCGGAGAAAACCACCCGACGTCGTCATTAGACGTGCCGTCGTATTCACCTCCTTCCGACGACGCAAACATCGGCGGACTCATCGACGTTGAGGCACATCACATGCCCGACCCAGATTACCTACGGCGGTGCCGTTATCGTGTAGTCGACGTAACCGCTCGCCAAGATTCCATCAACTGGATCTTGAAGGTTCACGCATATTACGAGTTTAGTCCGGTAACGGCGTTCCTCTCTGTCAACTACCTCGATCGTTTTCTCTCTTGCTCTCCACTTCCGGTACCTCCCATGCGCCTCTTCTATCTAAGAAAATCAAGGTTCTTCTGGAAAATATCAGATTTCCCGCGAAAGATGTCTGACTTGATTTCTTTTTATTCGCAGCAACATGGACAGTGGGAATATCATTTGATATCAGTGGCATGCTTGTCTTTAGCGGCGAAAATGGAGGAACCTGAAGTGCCTCTGTTACTGGACCTTCAATTAGTGGATCCCAGATTTGTATTCGAACCCAAGACTATTCAAAGAACGGAGCTCTTTGTCATGACCAAGCTACGCTGGAGATTACGCTCCATAACACCCTTCGATTATCTCCATCACTTCATCTCTAAGCTCTCTTGCTCCTCCGATCCGCAACCCGAATCCATAACCCGGTTCTTCTCCACTGCTTCCAGTCTCATCCTCAGCACCACCCTTGTCATTGATTTCGTGGGTTTTACGCCGTCGACCATAGCGGCCGCCGCCGTTCTCTGTTCGGCTGGCCAGGGCCAATCGCCACCGTTCTTTCATGATGGAGTTAACAAAGAAATGGTGAGAAGCTGTCAACAACTATTGGAGGATTACGTGGTGGACACGTGTCACTTTGCAGGCTATATATGCTCTGGAGCGGAGCCGGAGCCGCCTTCAAGTCCAGTAGGCGTGCTCGATGCGGCTAGTTCATGTGTCAGCTGCGATCCTCGCTCAGAGAACCCAGCGTCAAACAGCGAAGCCGAGCCGCCCAACAAGCGGGTGTTATCCCCTGAGCCTAATGGGGAATAG 1104 0.5172 MSLSPADASAARNSLCGEDADELISGENHPTSSLDVPSYSPPSDDANIGGLIDVEAHHMPDPDYLRRCRYRVVDVTARQDSINWILKVHAYYEFSPVTAFLSVNYLDRFLSCSPLPVPPMRLFYLRKSRFFWKISDFPRKMSDLISFYSQQHGQWEYHLISVACLSLAAKMEEPEVPLLLDLQLVDPRFVFEPKTIQRTELFVMTKLRWRLRSITPFDYLHHFISKLSCSSDPQPESITRFFSTASSLILSTTLVIDFVGFTPSTIAAAAVLCSAGQGQSPPFFHDGVNKEMVRSCQQLLEDYVVDTCHFAGYICSGAEPEPPSSPVGVLDAASSCVSCDPRSENPASNSEAEPPNKRVLSPEPNGE 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0328 367 MobiDBLite consensus disorder prediction 20 41 - -
Lele36g0328 367 Gene3D - 61 115 - -
Lele36g0328 367 Gene3D - 152 212 - -
Lele36g0328 367 ProSitePatterns Cyclins signature. 78 109 IPR006671 -
Lele36g0328 367 SMART Cyclin_C_2 214 340 IPR004367 -
Lele36g0328 367 FunFam D6-type cyclin 204 298 - -
Lele36g0328 367 SUPERFAMILY Cyclin-like 50 211 IPR036915 -
Lele36g0328 367 Pfam Cyclin, C-terminal domain 214 304 IPR004367 -
Lele36g0328 367 Pfam Cyclin, N-terminal domain 52 114 IPR006671 -
Lele36g0328 367 Pfam Cyclin, N-terminal domain 150 211 IPR006671 -
Lele36g0328 367 PANTHER CYCLINS 53 302 IPR039361 -
Lele36g0328 367 MobiDBLite consensus disorder prediction 336 367 - -
Lele36g0328 367 MobiDBLite consensus disorder prediction 26 40 - -
Lele36g0328 367 MobiDBLite consensus disorder prediction 338 355 - -
Lele36g0328 367 Gene3D - 51 60 - -
Lele36g0328 367 Gene3D - 213 280 - -
Lele36g0328 367 CDD CYCLIN 78 204 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0328 Lele-ChrLele36 1944364 1946033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0328 15 307 Core Cell Cycle Gene Families AT1G70210 38.487 7.08e-59 192