Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0301 ATGTTCAAAATGAACTGTGATTTAGGCAAGAGTTGTCAGAATGGGGAAGGTTCATGCTTTTGGCATGATGCCTTAGAGCAGGCCAATGCTATGAGCATGGAGACTCCCTCAGATCAAATGAGTGGCAAAACTGGGGAGCTAACACACCATAATAACAACACCTCAGACCAGGTGCATACAATTGATTCGGGAACTACACATTCTGAATTGCCAGAAAAAACTAATCAGATTGGCTCTGAGTCTTTGAATAATGAACAAAGGGATATTGGAACTAGGGAAACCACCTTTCTTCTCGATGAAAAATCACCTTCAAATGGTGTGACTGGGAATTCTGCTATTCAACTTCCTGCACAACCTCAATGTGACTTAGACAAGAGCTGTCAAACTGAAGAAGGTTCAGGTTTTCAACATGATACTTTAGAACTGGGCAATTCTATTGGCATGGGTGCTTCCTCAGAGAACTTGAGTGACAAAACTAGAAAGTCATTATGCCATATCCATAATACCTCAGAACAGTTGCATACACTTGATCCCAGAACTGCTCATTTTAAAATGTCTGAGAAAACTAATCAGACTGGCTCCAAATTTTTGAACAATGAACAAAGGGTCCTAGGTACTGAGGAAACCAGCTCTCTTCTTGATGAAAAACAGCTTACAGTTTCTGACAGTATGATTGGAGATTCTGTCATTCAATTGCCAACACAATCTCAGTGTGACTTAGACAATAGTTGCCAGAATGGAGGAGGTTCAGGCTTTCAACATAATACCTTAAAACAGGTTTCTGGTTCTTTATCTAATGATGAATCTCTGAACAAACGTCAGCAGGTCTCCCAAAATGATGATAATGAACCTGTGGAAAGAAGTGGTGCAAATGAACAATTAGATTCACCTTCTCAAGAAACTGGCATTAGTCCAAACTCTTTGCCAAGAAACTGCAAAAGGGCAACTCATGCTCGGTTAGGTTGCAAGGATAAAAGAACTGCAACATCATTGAAGAAAAAATATATTCTAAGAAGTAGTGACAGAGTTTTGCGGTCAAGGGTGCGTGAAAAACCTAAACCACCCCAATCAAACACTAATTTGGTTAATATGGACCGTGTTGGAGAAAATAGAAGAAAAGTCAGGAAGAAGAATAAGGGTAGAGGGAGGAGAGTGACCGATGAATTTTCAAGGATTAGAGCTCGTCTAAGATATTTTTTAAGTCGAGTGAGCTATGAGCAGTACTTGATTGATGCTTATTCTGGTGAAGGCTGGAAAGGATATAGCTTGGAAAAATTAAAACCTGAGAAGGAGCTTCAACATTCTAAGTCTAAAATACTTGGTTTTAAATTGAAAATTAGGGATTTGTTTCGACATTTGGATACATTGTGTGCTGAAGGGAGGCTTCCCCAATCTTCGTTTGATTCTGAAGGAGAGATTGGCAGTGAGGATATATTTTGTGCAAAATGCAGGTCCAAAGAGTTGACCACTGGTAATGATATAATACTTTGTGATGGTGCTTGTGATCGTGGATTTCACCAGTTCTGTTTGGAACCTCCATTGTTAACTGAGAATATTCCACCTGATGATGAGGGTTGGCTGTGCCCGGGATGTGATTGCAAGGATGACTGTTTTGATCTCCTTAATGACTCCTTCGGAACAAGGCTCTCTATATGTGATTCCTGGGAGAGGGTTTTTCCAGAGGCAGCCGCAGCTGCTAGGAATAAAGTGGATGACAAGTTGGGAGTTCCATCAGATGATTCCGAGGATGATGATTATAATCCTGATGTTGCAGATGATGAGGAGGTTGAAGGAGGCGAGTCAAGTTCTGATGAGTCTGAGAATGATTCTGCTTCTGAGAAAATGGAGGCTTCACGTAATGAGAACCCATACTTAGGCCTTCCTTCTGAAGATTCAGAGGACAACGATTATGATCCTGATGCTGTAGATCATGACAAAGATGTAGCTGAAGAAAGTTCCAGCTCTGATTTCACGTCGGATTCTGAGGACCTTGCTGATGTAGTTAAGGGTAATGCATTATCTGGACAGGATAACGATCCTGTACCTGCATCATCTTTGCCAGAGCTAGATCCTGGTGGTGAAGATTCCACTCCTGTTTCTGGGAAAAGACATATTGAAAGGTTGGACTACAAAAAACTGTATGATGAGGCGTACCAAAATGCTCCATCTGATACTAGCGATGATGAAGATTGGACTGATAGTCCTGCTTTAAGTAGGAAAAAGAAAGTCACTAAGAAAGGGCCGCCAGTGTCACCAAATGGGAAAACCTCATTACTGGATCATATGCAGAAAGAAACTGAACATCCTCCTAGGAGAAATACACGTCAAACTAAAGTTGAAAATATGGACGATTCACCCAGTAAATCACTTGAAGGCTGTAAGAGGGCTGGTTCAAATGATAAAAAACGAGGATCTTCAACTTACAAAAGACTTGGGGAAGATGCAGTCAAGGTACTTTATAAAACCTTTAAAGAAAATCAGTACCCAGATCGTGCCACAAAAGAAAGCTTGGCACAAGAACTTGGACTTACTTTCACCCAGGTTAGCAAATGGTTCGAGAATACTCGTTGGAGCTTTCGGAATTCCCCACGTATGGAAGCCAGGGCAAATAAAAGTGCTTCACAGGGTGCCTCGTCCAGCAGAGTGGAAAATGAGATGGCACTTGGTGATGAGAAGACACACTCAAAATCAGTGTCCCTGGAGGGGCATATACAGAAATCAAAATCAAAAAGGAAGCGTACTACAGGTACTGAGGAATCTGAAGCAGACCTAAACATTGATAGTGCGGCAACAAATCCTCTTGTTCCCTCGCCTAAAGGTGGTGAAGTGCAGAGAAATCGCAAAACGAAAACAAGGAAGAAAAAATGA 2868 0.4135 MFKMNCDLGKSCQNGEGSCFWHDALEQANAMSMETPSDQMSGKTGELTHHNNNTSDQVHTIDSGTTHSELPEKTNQIGSESLNNEQRDIGTRETTFLLDEKSPSNGVTGNSAIQLPAQPQCDLDKSCQTEEGSGFQHDTLELGNSIGMGASSENLSDKTRKSLCHIHNTSEQLHTLDPRTAHFKMSEKTNQTGSKFLNNEQRVLGTEETSSLLDEKQLTVSDSMIGDSVIQLPTQSQCDLDNSCQNGGGSGFQHNTLKQVSGSLSNDESLNKRQQVSQNDDNEPVERSGANEQLDSPSQETGISPNSLPRNCKRATHARLGCKDKRTATSLKKKYILRSSDRVLRSRVREKPKPPQSNTNLVNMDRVGENRRKVRKKNKGRGRRVTDEFSRIRARLRYFLSRVSYEQYLIDAYSGEGWKGYSLEKLKPEKELQHSKSKILGFKLKIRDLFRHLDTLCAEGRLPQSSFDSEGEIGSEDIFCAKCRSKELTTGNDIILCDGACDRGFHQFCLEPPLLTENIPPDDEGWLCPGCDCKDDCFDLLNDSFGTRLSICDSWERVFPEAAAAARNKVDDKLGVPSDDSEDDDYNPDVADDEEVEGGESSSDESENDSASEKMEASRNENPYLGLPSEDSEDNDYDPDAVDHDKDVAEESSSSDFTSDSEDLADVVKGNALSGQDNDPVPASSLPELDPGGEDSTPVSGKRHIERLDYKKLYDEAYQNAPSDTSDDEDWTDSPALSRKKKVTKKGPPVSPNGKTSLLDHMQKETEHPPRRNTRQTKVENMDDSPSKSLEGCKRAGSNDKKRGSSTYKRLGEDAVKVLYKTFKENQYPDRATKESLAQELGLTFTQVSKWFENTRWSFRNSPRMEARANKSASQGASSSRVENEMALGDEKTHSKSVSLEGHIQKSKSKRKRTTGTEESEADLNIDSAATNPLVPSPKGGEVQRNRKTKTRKKK 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0301 955 SMART HOX_1 804 866 IPR001356 GO:0003677
Lele36g0301 955 MobiDBLite consensus disorder prediction 262 311 - -
Lele36g0301 955 SUPERFAMILY Homeodomain-like 803 864 IPR009057 -
Lele36g0301 955 ProSiteProfiles 'Homeobox' domain profile. 802 862 IPR001356 GO:0003677
Lele36g0301 955 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 473 536 IPR013083 -
Lele36g0301 955 Pfam PHD-finger 479 534 IPR019787 -
Lele36g0301 955 MobiDBLite consensus disorder prediction 570 705 - -
Lele36g0301 955 Gene3D - 804 875 - -
Lele36g0301 955 Pfam Homeodomain 811 857 IPR001356 GO:0003677
Lele36g0301 955 ProSiteProfiles Zinc finger PHD-type profile. 477 534 IPR019787 -
Lele36g0301 955 MobiDBLite consensus disorder prediction 342 362 - -
Lele36g0301 955 CDD homeodomain 810 862 IPR001356 GO:0003677
Lele36g0301 955 MobiDBLite consensus disorder prediction 577 606 - -
Lele36g0301 955 ProSitePatterns Zinc finger PHD-type signature. 480 531 IPR019786 -
Lele36g0301 955 SMART PHD_3 479 532 IPR001965 -
Lele36g0301 955 MobiDBLite consensus disorder prediction 760 811 - -
Lele36g0301 955 MobiDBLite consensus disorder prediction 639 653 - -
Lele36g0301 955 MobiDBLite consensus disorder prediction 719 811 - -
Lele36g0301 955 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 274 921 - -
Lele36g0301 955 MobiDBLite consensus disorder prediction 262 319 - -
Lele36g0301 955 SUPERFAMILY FYVE/PHD zinc finger 467 537 IPR011011 -
Lele36g0301 955 MobiDBLite consensus disorder prediction 856 882 - -
Lele36g0301 955 FunFam Homeobox protein HAT3.1 460 536 - -
Lele36g0301 955 MobiDBLite consensus disorder prediction 885 920 - -
Lele36g0301 955 CDD PHD_PRHA_like 479 531 IPR045876 -
Lele36g0301 955 MobiDBLite consensus disorder prediction 856 955 - -
Lele36g0301 955 MobiDBLite consensus disorder prediction 35 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0301 Lele-ChrLele36 1773376 1778077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0301 318 863 Homeobox Transcription Factor Family AT3G19510 45.502 3.54e-133 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Lele36g0301 PHD 1.2e-10 CL0390