LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele36g0277	ATGGGTAACATCTCTGTGTGTGTTCTATTATTGATATTTGCTAGTGCTTTCCTGACTCATTCTTCATATTCTCATGAGCTGACCGGCTCCAAAAGAGAAGCTTTAGAAATTATCATAGGCGGCGGCGGCTGGGGCAATACTGCTAATGCTCCTTATTCTCCTTCTTCCACAGAATGTGGAGAATGTCAAGCTCCTTCCCCTCCTCCTCCACCACCACCACCATGCCCACCTCCTCTTCCTCCTCCTCCCCCACCTTCATGCTCTCCGCCTCCTCCACCACCACCATGCCCGCCTCCTCTTCCTCCTCCTCCGCCACCTCCTCCTCCACGTCCTGTACCGCCGCAAGAGGGACCCAGGCTGAAGAACGCGAAAAAAGTGCTTCTAAAATTGAAGCAGACCATCAGTGACCCGAAAGGGAAAACGTCAAACTGGAAGAAGTCCATCTACGTATGTAAATTCAACGGCATCCGTTGCTCCAAATATCCGAACGAAAAACAGAAAGCAGTCGCTGGACTGGACTTCAACGGATACTCATTCTCCGGCCTGCAGGAACATAAACCGCTCGACCTTTTCGGAAGCTTGGCCATGATCCCAGAGTTAGCATTCTTCCACGTGAACTCCAACAATTTCACCGGCCAAGTCCCACCTCAAATCTCCAACTTCTCATTTTTCTACGAGCTCGATCTCAGCAACAACAAGATATCCTGCGAGTTCCCAAAAGAGGTCCTTCAATCGAAACAACTGTTGTTCCTGGATCTCAGGTTCAACGAACTTTACGGCTCGATTCCACCACAGCTCTTCAAGTTGCAACTAGACGTCATCTTCATCAACAACAACCAGCTCACCGGAAGCCTTCCGGACGAATTAGGGTGCACGCCGGCCAGGTATCTCACATTCGCCAAAAACCAGTTAACCGGCCCAATCCCCAAGAGCATCGGTAAAGCCACAAACATCACGGAAGTGCTGTTCTTGGGGAATCAGTTTTCTGGTTGTTTACCTTATGAGATCGGGTTCCTAGTAAACGCTACGGTTTTTGATGTGAGCAAGAATTGGTTGACTGGTCCGATCCCACACTCGTTTGCCTGCTTAGATAACATCCAGTTTTTGAATTTGGCTGATAATCAATTCTACGGGCCCGTTCCGGAGTCGGTGTGCAAGCTTCCGGAGCTCCAAAAGGGCAGTGGGAATTTGACGCTGTCGGGTAATTATTTTACCCAGGTGGGACCCGAATGCAGGAAGCTGATAGACAAGAAAGTGCTGGATGTGAGCAGAAATTGCATTCTGGGACTTCATGACCAGAGAACACCAAATGAGTGTAACAAGTTTTTCTCCAAGGTTAAACCATGTCCAAACCCCAAGACTCTGAACATCGTCCCTTGCAACAAGAACTATGAGAGCTACAAGGGGATGGAGCCTGCCCGACCAGCGGCAGCAGCAGGTTTACCGCCGACTCCGATGACCTACAAATCCCTCAAACCGCACCGCTTGTGA	1491	0.4977	MGNISVCVLLLIFASAFLTHSSYSHELTGSKREALEIIIGGGGWGNTANAPYSPSSTECGECQAPSPPPPPPPPCPPPLPPPPPPSCSPPPPPPPCPPPLPPPPPPPPPRPVPPQEGPRLKNAKKVLLKLKQTISDPKGKTSNWKKSIYVCKFNGIRCSKYPNEKQKAVAGLDFNGYSFSGLQEHKPLDLFGSLAMIPELAFFHVNSNNFTGQVPPQISNFSFFYELDLSNNKISCEFPKEVLQSKQLLFLDLRFNELYGSIPPQLFKLQLDVIFINNNQLTGSLPDELGCTPARYLTFAKNQLTGPIPKSIGKATNITEVLFLGNQFSGCLPYEIGFLVNATVFDVSKNWLTGPIPHSFACLDNIQFLNLADNQFYGPVPESVCKLPELQKGSGNLTLSGNYFTQVGPECRKLIDKKVLDVSRNCILGLHDQRTPNECNKFFSKVKPCPNPKTLNIVPCNKNYESYKGMEPARPAAAAGLPPTPMTYKSLKPHRL	496

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele36g0277	496	MobiDBLite	consensus disorder prediction	477	496	-	-
	Lele36g0277	496	MobiDBLite	consensus disorder prediction	49	94	-	-
	Lele36g0277	496	PRINTS	Proline rich extensin signature	102	123	-	-
	Lele36g0277	496	PRINTS	Proline rich extensin signature	69	85	-	-
	Lele36g0277	496	PRINTS	Proline rich extensin signature	90	102	-	-
	Lele36g0277	496	Gene3D	Ribonuclease Inhibitor	292	468	IPR032675	-
	Lele36g0277	496	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	99	108	-	-
	Lele36g0277	496	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	115	476	-	-
	Lele36g0277	496	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	192	285	-	-
	Lele36g0277	496	MobiDBLite	consensus disorder prediction	63	94	-	-
	Lele36g0277	496	Pfam	Leucine rich repeat N-terminal domain	122	159	IPR013210	-
	Lele36g0277	496	SUPERFAMILY	L domain-like	123	429	-	-
	Lele36g0277	496	Gene3D	Ribonuclease Inhibitor	121	291	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele36g0277	Lele-ChrLele36	1641243	1642733	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele36g0277	116	445	Leucine-rich Repeat extension Gene Families	AT4G13340	42.169	9.32e-76	251