Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0269 ATGTCTGAAGAGAAAGAAGCTCCAAAGCAGCACCAGATGGGGTCATGGGGTCTCTCGATTCCTGACGAGAATTTTTCAAACATCGATCCACCACCGATCATAGGAAGCTCTTCCAACAATAACGACCCTCTCATTGCTGATCAGAACCAACAAGTCGACGACGGAGTTAATGCTGAAGGTGGTGATAAGGCGACGTTGTCGAGGACAATCCGAGGAGGAAGGAAGAGGACTACTGGTAAGACCACCGGTGGAGGAGGGAAAGGTGGGAACGAAGCTGGTGGTGGTGAAGAAGCCGATGATCACGACATGCATATATGGACAGAGAGAGAGAGGAGGAGGAAGATGAGAAACATGTTCGCCAACCTTCATGCTCTGCTTCCTCAGCTTCCTCCTAAGGCTGACAAATCAACCATTGTTGATGAAGCGGTGAGGTACATTAAAAGCCTGGAGATCACTCTGGAGAATCTGGAAAAGAAAAAACAGGAAAGGCTGATGAAGCAAGCCCAGCAGTCTTCTGATTCAAGCTTCACCGTTGTGTATAACCCTTCTTCTGTGAAGAATATCAACTCTCAGAGGCATCCCTACGTGTCAAGGGAGGCATTCATGGCTGATCATGGTGGATCTTCCAATCATAACTCAAGCCCTAATAATAACAACTTGGCCTTCACCACAAAAGCCATTACCATTGGAACTTCACCTTCACTATCACTTCCGCGAACTGTGAATAACCCATCAATAGGGTTTCAGACTTGGAGCTCTTCAAATGTTGTCGTCAACATTTGTGGTGATCAGGCTCAGTTCAACGTGTGCTCCCTCAAGAGTCCAGGCCTCTTCACCAGCATATGCACTGCGTTTGAGAAGTACAGAATCGAGGTTTTGTCTGCTCATGTTTCATCTGATGATGCTCGATGCTTTTACATGATCCATGCCCAGGTAAATGGAGGTTCAAATCAGGCATTCACAGCGGAGGAAGCTTTCAGGCAAGCAGCTGGAGAAATGACGCTGTGGCTATCTTAA 1017 0.472 MSEEKEAPKQHQMGSWGLSIPDENFSNIDPPPIIGSSSNNNDPLIADQNQQVDDGVNAEGGDKATLSRTIRGGRKRTTGKTTGGGGKGGNEAGGGEEADDHDMHIWTERERRRKMRNMFANLHALLPQLPPKADKSTIVDEAVRYIKSLEITLENLEKKKQERLMKQAQQSSDSSFTVVYNPSSVKNINSQRHPYVSREAFMADHGGSSNHNSSPNNNNLAFTTKAITIGTSPSLSLPRTVNNPSIGFQTWSSSNVVVNICGDQAQFNVCSLKSPGLFTSICTAFEKYRIEVLSAHVSSDDARCFYMIHAQVNGGSNQAFTAEEAFRQAAGEMTLWLS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0269 338 Pfam Helix-loop-helix DNA-binding domain 104 150 IPR011598 GO:0046983
Lele36g0269 338 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 11 337 IPR044278 GO:0003700|GO:0006355|GO:0009960
Lele36g0269 338 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 102 169 IPR036638 GO:0046983
Lele36g0269 338 Gene3D - 94 168 IPR036638 GO:0046983
Lele36g0269 338 CDD bHLH_AtbHLH_like 104 157 IPR045239 -
Lele36g0269 338 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 99 149 IPR011598 GO:0046983
Lele36g0269 338 MobiDBLite consensus disorder prediction 30 55 - -
Lele36g0269 338 MobiDBLite consensus disorder prediction 1 101 - -
Lele36g0269 338 Coils Coil 139 166 - -
Lele36g0269 338 SMART finulus 107 155 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0269 Lele-ChrLele36 1595712 1598942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0269 69 338 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 40.956 1.51e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele36g0269 HLH 1.6e-10 No_clan