Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0268 ATGCCTGGGAGCTTAGAGCCGTTGGATTTGGGGATTCAGATTCCTTACCACTTCAGTTGTCCGATCTCGCTCGAGTTGATGCGTGACCCCGTCACCGTCTGCACTGGTCAGACCTACGACCGAGCCAGCATCGAGTCCTGGGTCGCCACCGGCAACACCACCTGTCCCGTGACTCGGGCTCCGCTCACCGACTTCACTCTTATTCCCAACCACACTCTTCGCCGTCTTATACAGGACTGGTGCGTCGCTAACCGGGCTTTCGGAATTGAGCGTATTCCAACGCCCAAACAACCCGCCGACCCGGCCTTAGTGCGTTCCTTGTTGAACCAAGTCTCTTCCGAGTCGTCTCAGAGTCAATCACGCCTCTCTGCCTTGCGTCGACTCAAGGGACTCGCGCGTGACTCGGACAAGAATCGTTCTCTTATTGGCTCTCACAACGTCCGCGAAATCCTTCTCCCTATTGTTTTCTCCGAACTCAATTCCGATTCTTTCGAGCTGAGCCACGAGTCACTAGCTCTGCTTGTGATGTTTCCGCTCCATGAGCCGGAATGCACCACCGTCGCATCGGATCCGGATAAAATCAGGTATCTATCGCGTCTCCTGTTTCACACATCAATGGACGTCCGAGTCAACTCGGCAGCGCTCATCGAAATCGTCGCGGCCGGAACTCGTTCGTCGGAGCTCCGATCTCAAATAAGCTGTATCGACGAAATATACGAGGGAGTCATCGACATTCTGAAGAATCCAATCGCGTATCCTCGAGCTCTCAAGATCGGAATCAAGGCGCTGTTCGCTGTGTGTCTGGTGAAAGAGACGCGGGAAAAAGCGGTGGCAACCGGAGCACCGGAGATCCTCATCGATCGACTGGCAGATTTCGAGAAATGCGACGTGGAGAGGGCCCTCGCAACGATAGAACTGCTGTGTCGAATCCCGGCGGGTTGCGAGGCGTTCGCTGGGCACGCGCTGACGGTGCCGCTGCTGGTGAAGATAATACTGAAAGTATCGGACCGGGCGACGGAGTACGCGGCGGGAGCGCTGCTGTCACTGTGCTCGGAATCGGAGCAGAGCCAGAGGGAGGCGGTGGCGGCGGGGGTGCTGACGCAGCTGCTGTTGCTGGTGCAGAGCGATTGCACGGAGAGGGCGAAGAAGAAGGCGCAACTGTTGCTGAAGCTTCTTCGGGATTCGTGGCCGCAACAAGATTCCCTCGGAAACTCGGACGATTTTGCATGCAGCGAAGTCGTCCTAGTCCCCTTGTGA 1257 0.5672 MPGSLEPLDLGIQIPYHFSCPISLELMRDPVTVCTGQTYDRASIESWVATGNTTCPVTRAPLTDFTLIPNHTLRRLIQDWCVANRAFGIERIPTPKQPADPALVRSLLNQVSSESSQSQSRLSALRRLKGLARDSDKNRSLIGSHNVREILLPIVFSELNSDSFELSHESLALLVMFPLHEPECTTVASDPDKIRYLSRLLFHTSMDVRVNSAALIEIVAAGTRSSELRSQISCIDEIYEGVIDILKNPIAYPRALKIGIKALFAVCLVKETREKAVATGAPEILIDRLADFEKCDVERALATIELLCRIPAGCEAFAGHALTVPLLVKIILKVSDRATEYAAGALLSLCSESEQSQREAVAAGVLTQLLLLVQSDCTERAKKKAQLLLKLLRDSWPQQDSLGNSDDFACSEVVLVPL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0268 418 SUPERFAMILY RING/U-box 12 90 - -
Lele36g0268 418 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 87 IPR013083 -
Lele36g0268 418 Gene3D - 93 407 IPR011989 -
Lele36g0268 418 SUPERFAMILY ARM repeat 106 392 IPR016024 -
Lele36g0268 418 SMART Ubox_2 17 80 IPR003613 GO:0004842|GO:0016567
Lele36g0268 418 CDD RING-Ubox_PUB 18 59 IPR045210 -
Lele36g0268 418 FunFam RING-type E3 ubiquitin transferase 8 90 - -
Lele36g0268 418 ProSiteProfiles U-box domain profile. 13 87 IPR003613 GO:0004842|GO:0016567
Lele36g0268 418 Pfam U-box domain 14 85 IPR003613 GO:0004842|GO:0016567
Lele36g0268 418 PANTHER WDSAM1 PROTEIN 12 399 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0268 Lele-ChrLele36 1592321 1593577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0268 1 415 U-box Gene Family AT3G19380 68.171 0.0 560