Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0253 ATGTCCTCCAACACACCATCCAGGCTCCTCCCACCTTCCTCCTCCGCCCCCTCCTCTCTTCCGCGCCCCACCTCCCTCACTCCCGACCAAGAACTCTCTGTCATCGTCGCCGCACTCACCAACGTCGTCCTTGGCTCCACCGCCGATCTCACCAACCAGTTCAACTTACACCATTCCTCCGCCGCCGGCAACATCGCCCACAACGCCAATCGCATGGCACCAGACATGAATGTTGGAGCCGGCCGCCCTGGTTTAGGATTCGCGTCCTGTTCCTACCGCAAGTTTTTACCAGAAGAGAAGACCAAGAATGGCGGGAACAAACAGCCGCAGAATAGGGCGAAGAAGAAGTACCGGGGAGTGAGGCAGAGGCCATGGGGGAAATGGGCAGCAGAGATTCGAGACCCGGGACGGGCGACCCGGGTCTGGCTGGGAACCTTCAAGACGGCCAAGGAAGCGGCTCGCGCGTACGATGAAGCGGCCATCAAGTTCCGTGGGCCCCGCGCCAAGCTGAATTTTCCTTTCTCTGACGACTCGTTGCTGAATTTGCAGCTCCGTCCGCCACCGGAAGCTCCTTCAACGGCGACGCCGCTGGCGACAGGGCCGTCGGAGGAGGAGCAGGGGAATACCGAGAATCTGAACAGTGGAACGGCAGCGATGGGGTCTGAGGATGATGAATTCTGGGATAGGATTGCAAAAGCAGATTTAGAACGATGGTGGATTGATTTTGCTGCCGGAGACTTTTCGGATTCTGCTCCCGGAACTTCCCAGAGTGGGTGA 777 0.5882 MSSNTPSRLLPPSSSAPSSLPRPTSLTPDQELSVIVAALTNVVLGSTADLTNQFNLHHSSAAGNIAHNANRMAPDMNVGAGRPGLGFASCSYRKFLPEEKTKNGGNKQPQNRAKKKYRGVRQRPWGKWAAEIRDPGRATRVWLGTFKTAKEAARAYDEAAIKFRGPRAKLNFPFSDDSLLNLQLRPPPEAPSTATPLATGPSEEEQGNTENLNSGTAAMGSEDDEFWDRIAKADLERWWIDFAAGDFSDSAPGTSQSG 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0253 258 PANTHER DNA-BINDING DOMAIN 80 202 IPR044808 GO:0003700|GO:0009873
Lele36g0253 258 MobiDBLite consensus disorder prediction 98 120 - -
Lele36g0253 258 PRINTS Ethylene responsive element binding protein signature 117 128 IPR001471 GO:0003700|GO:0006355
Lele36g0253 258 PRINTS Ethylene responsive element binding protein signature 139 155 IPR001471 GO:0003700|GO:0006355
Lele36g0253 258 MobiDBLite consensus disorder prediction 195 218 - -
Lele36g0253 258 SMART rav1_2 116 179 IPR001471 GO:0003700|GO:0006355
Lele36g0253 258 Gene3D AP2/ERF domain 115 174 IPR036955 GO:0003700|GO:0006355
Lele36g0253 258 SUPERFAMILY DNA-binding domain 116 175 IPR016177 GO:0003677
Lele36g0253 258 MobiDBLite consensus disorder prediction 184 225 - -
Lele36g0253 258 FunFam Ethylene-responsive transcription factor 2 115 174 - -
Lele36g0253 258 ProSiteProfiles AP2/ERF domain profile. 116 173 IPR001471 GO:0003700|GO:0006355
Lele36g0253 258 Pfam AP2 domain 116 165 IPR001471 GO:0003700|GO:0006355
Lele36g0253 258 CDD AP2 115 173 IPR001471 GO:0003700|GO:0006355
Lele36g0253 258 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0253 Lele-ChrLele36 1517118 1517894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0253 114 173 AP2-EREBP Transcription Factor Family AT2G47520 80.000 3.49e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele36g0253 AP2 2.1e-15 CL0081