Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0236 ATGGGGGTTTGTACGTCCAAGCCGCAAAAGCCGAACCCATTTTCCGTTCAGGAGCTAGAAGGCGACCATGGCTCCTGCGATCCTTCAAGCATCCCGAAAGGCTCACCTACTCCGAAAAATGAGGTCGTTTCAGGGAAGCGGTCTCCGTTCTTCCCATTCTACAGCCCCAGCCCAGCTCGCTTCTTTAAGAAATCTATGGCGCCTACGGGAGGTCCCCGGAGTGCGAGTTCGACGCCGGGGAGAATTTTCCGGCGTCCCTTCCCTCCGCCGTCGCCGGCGAAACACATAAAGGCTTTCCTAGCTAGAAGACAGGGAAAGAAGACTTCGACGGCGATACCGGAAGATGGAGAGGAGGTAGATTTGGACAAGAGGTTTGGGTTTTCGAAAGAGTTCACGAGTAGACTTGAGGTTGGGGAAGAAGTGGGCAGAGGGCATTTTGGTTATACTTGTTCTGCTAGGTTTAAGAAGGGCGAGCATAAGGGCCAGCAAGTTGCTGTGAAGGTCATCCCTAAAGCTAAGATGACAACAGCAATTGCAATTGAAGATGTACGAAGGGAAGTGAAAATATTGCGAGCATTGACTGGACACAACAATCTCGTACAATTTTATGATGCATTCGAAGACCAGGATAATGTCTATATTGTTATGGAGTTATGTGAAGGAGGGGAGCTTTTAGATAGGATATTATCAAGAGGAGGGAAATACTCGGAAGAAGATGCAAAGGCTGTCATGGTACAGATACTAAACGTCGTTGCATTTTGTCATCTTCAGGGTGTGGTGCACCGAGATCTAAAGCCAGAGAATTTCTTGTATGCTTCGAAGGATGAGAATTCCGAGTTAAAGGCAATAGACTTTGGATTATCAGACTTTGTCAAACCAGATGAAAGGCTCAATGACATTGTTGGGAGTGCATACTATGTGGCACCTGAAGTTCTACATAGATCTTATAGTATAGAGGCCGATATCTGGAGCATAGGTGTAATTGCATATATTCTTTTATGTGGTAGTCGCCCCTTTTGGGCTCGGTCGGAGTCTGGCATTTTTCGGGCAGTTTTGAAAGCAGATCCAAGCTTTGATGAAGCTCCCTGGCCCTCTTTATCTTTGGAAGCAAAAGATTTTGTCAAGCGTCTATTAAACAAGGACCCACGGAAGCGACTTTCAGCCGCTCAGGCCTTAAGTCACCCTTGGATACGAAATCACAATAACGTAAAAGTTCCTCTTGATATTCTAATATTTAGGCTCATGAAGGCTTATATGCGATCATCATCCTTGCGGAAGGCTGCTTTAAGGGCCTTATCCAAGACATTGACTGCAGATGAACTTCATTATCTGAGGGAGCAGTTTGCTTTGTTGGAGCCAAGCAAAAATGGCAGTATAACCTTGGACAACATTAGGACGGCCCTGATGAAACATGCAACAGATGCCATGAAGGAGTCTCGGATCCCCGATTTTCTTGCCTCGCTAAATGCGTTACAATATAGAAGAATAGATTTTGAAGAATTTTGTGCGGCTGCATTAAGCGTGCATCAGCTCGAAGCTCTAGAGCGATGGGAACAACATTCACGCTGTGCTTATGAACTTTTCGAGAAAGACGGAAACAGGGCTATTATCATTGAAGAACTTGCTTCAGAACTAGGACTTGGTCCTTCTATTCCAGTTCATGTTGTACTACAGGACTGGATAAGGCACACCGATGGGAAGCTAAGCTTTCTCGGGTTCGTCAAATTGTTACATGGTGTATCCAGCCGAAGTCTTGCAAAGGTTCAGTAA 1770 0.4582 MGVCTSKPQKPNPFSVQELEGDHGSCDPSSIPKGSPTPKNEVVSGKRSPFFPFYSPSPARFFKKSMAPTGGPRSASSTPGRIFRRPFPPPSPAKHIKAFLARRQGKKTSTAIPEDGEEVDLDKRFGFSKEFTSRLEVGEEVGRGHFGYTCSARFKKGEHKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHNNLVQFYDAFEDQDNVYIVMELCEGGELLDRILSRGGKYSEEDAKAVMVQILNVVAFCHLQGVVHRDLKPENFLYASKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYSIEADIWSIGVIAYILLCGSRPFWARSESGIFRAVLKADPSFDEAPWPSLSLEAKDFVKRLLNKDPRKRLSAAQALSHPWIRNHNNVKVPLDILIFRLMKAYMRSSSLRKAALRALSKTLTADELHYLREQFALLEPSKNGSITLDNIRTALMKHATDAMKESRIPDFLASLNALQYRRIDFEEFCAAALSVHQLEALERWEQHSRCAYELFEKDGNRAIIIEELASELGLGPSIPVHVVLQDWIRHTDGKLSFLGFVKLLHGVSSRSLAKVQ 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0236 589 SUPERFAMILY Protein kinase-like (PK-like) 131 435 IPR011009 -
Lele36g0236 589 SUPERFAMILY EF-hand 425 579 IPR011992 -
Lele36g0236 589 MobiDBLite consensus disorder prediction 64 89 - -
Lele36g0236 589 ProSitePatterns Protein kinases ATP-binding region signature. 141 167 IPR017441 GO:0005524
Lele36g0236 589 MobiDBLite consensus disorder prediction 1 48 - -
Lele36g0236 589 ProSiteProfiles Protein kinase domain profile. 135 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0236 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Lele36g0236 589 Gene3D Transferase(Phosphotransferase) domain 1 225 420 - -
Lele36g0236 589 Pfam Protein kinase domain 136 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0236 589 FunFam CDPK-related kinase 1 433 506 - -
Lele36g0236 589 SMART serkin_6 135 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0236 589 Gene3D - 421 579 - -
Lele36g0236 589 CDD STKc_CAMK 136 396 - -
Lele36g0236 589 Gene3D Phosphorylase Kinase; domain 1 137 224 - -
Lele36g0236 589 FunFam Calcium-dependent protein kinase SK5 307 402 - -
Lele36g0236 589 FunFam CDPK-related kinase 3 127 299 - -
Lele36g0236 589 PANTHER SERINE/THREONINE-PROTEIN KINASE 122 564 - -
Lele36g0236 589 FunFam CDPK-related kinase 1 128 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0236 Lele-ChrLele36 1423099 1428491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0236 1 585 EF-hand Containing Proteins AT3G50530 72.468 0.0 917
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele36g0236 Pkinase 2.8e-71 CL0016