Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0230 ATGGGCTCTCTTCCTCCTCCACAACTGAACTTGGATTTGAGACCCACTTTTGTTCCCCAGACGATCGCTGATTTCCTGCTTATGAACTCCTGGCGGTTTGATGATAGGGTGCCTGATTCTCAGCCAGTATTGGAAGAATTTATTCCCTTGAGGAAAGAATGTGATCAGAAGGAGGAAAATGAAACAGGGAAGGAATGCATAGATAAGAAGAATTGGATGAGTTCTGTACAACTCTGGAGCACTGATAGTCATCCCGCCTGTGAACAAAAAGAGCATTATAAGAAAAATGAAGAACACTCTGTGGCAGAGGATCCTTCCAAATCTTGTAGAAATAGAATTGGGAGGGGCTTTATGCCCTTTACAACATACAGTCCAGTTCATGTGACAAGTGTGGCAACCAAGGAAGAAAAGGAAGAGTCTGATATTGATGGACTTTCTCTTGTGACTCCTGGAGTTAAAAATCTGAGAGAGGGATCTGTCTCTAGCGGATCAGGAATAACATCTGGTAGGGCGGTTTCATCCCCTCCTTGCAGTGACCAACCAAGTTTACGCACTGGACCGCAGCAGACTGCTCGGAAACAAAGAAGGTGTTGGTCAACAGAGCTTCATCGTCGATTTGTCAATGCCCTGCAGCAACTTGGAGGTTCTCAAGCTGCCACTCCAAAGCAAATTAGAGAACTCATGCAAGTTGAGGGCCTGACCAACGATGAAGTGAAGAGCCATTTGCAAAAATACCGACTTCATACCCGAAGACTTCCAGCTTCTTCAGCTACACCTGGTAACCAGTCTGTTGTAGTTCTTGGGGGTTTGTGGATGTCCCAAGATCAGTATAATGACTCATCCAAGGGTAGTGTTTCAGGGTCTGGCTCTCCTCAAGTTCCCGTCCAGTTAGCTTCAGGATCTGGAGGAGTAATTCCCCAACAGAAGATGACAGCATATTTAAAATCTGCTTGCAACCTTAAGCTAAAAGGTACCTTCTTTGTGTATACTGTGGTCCATGAGATGAGACTCCTTTGCAACATTGCTCTGTTCTGA 1035 0.4522 MGSLPPPQLNLDLRPTFVPQTIADFLLMNSWRFDDRVPDSQPVLEEFIPLRKECDQKEENETGKECIDKKNWMSSVQLWSTDSHPACEQKEHYKKNEEHSVAEDPSKSCRNRIGRGFMPFTTYSPVHVTSVATKEEKEESDIDGLSLVTPGVKNLREGSVSSGSGITSGRAVSSPPCSDQPSLRTGPQQTARKQRRCWSTELHRRFVNALQQLGGSQAATPKQIRELMQVEGLTNDEVKSHLQKYRLHTRRLPASSATPGNQSVVVLGGLWMSQDQYNDSSKGSVSGSGSPQVPVQLASGSGGVIPQQKMTAYLKSACNLKLKGTFFVYTVVHEMRLLCNIALF 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0230 344 MobiDBLite consensus disorder prediction 155 195 - -
Lele36g0230 344 MobiDBLite consensus disorder prediction 154 197 - -
Lele36g0230 344 Pfam Myb-like DNA-binding domain 195 246 IPR001005 -
Lele36g0230 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 190 250 IPR017930 -
Lele36g0230 344 Gene3D - 192 250 - -
Lele36g0230 344 SUPERFAMILY Homeodomain-like 190 251 IPR009057 -
Lele36g0230 344 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 193 248 IPR006447 GO:0003677
Lele36g0230 344 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 40 302 IPR044787 GO:0003700|GO:0006355
Lele36g0230 344 FunFam Myb family transcription factor 192 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0230 Lele-ChrLele36 1394230 1396898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0230 40 272 G2-like Transcription Factor Family AT2G03500 40.741 1.07e-40 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele36g0230 Myb_DNA-binding 1.7e-06 CL0123