Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0212 ATGCCGCGACCTTGCTTTCACAAGCTTATTTGTCCCTCCACGCTCCAATCCCGGCAGCTGACTATTCCAGATAATTTTCTGAGAAAATTTGGGGATGATCTTTCTACAGTTGCTACCCTCACCGGCCCTGATGGCAGTGTCTGGCGAGTAGGATTAAAAAGGTTGGGCAACAAATCTTGGCTCATTGATGGGTGGCAGGAATTTGTTCAACGCTACTCCATTGGTGTTGGTTACTTGCTGGTATTTAGATATGAAGGGAAATCATCATTCAATGTTCATATTTTCAATTTGGCTACTTGTGAGATAACTTACCAATCAAACACACGGAGCAGTAATGAAGGGACTTTCTTTCCAAATCAACATCTTAATTTTGATGATCTTGAAAATGAAGACGACTCAATTGAATTCTTAGATTCATCACCTTCATCCCTTACTCCTGGTGCATTGCAGAACAAGGCTTTTCCTGGAACCTCAGCATTGCAGAATTTGTTCCATGGGTCTAAACTTAACTCCATAAACTGGGGAGATGGGGGGAATTCCCTTTCTCCTGAGGGTGCCAATTCTCAAGACAATCAATCAAGCAGAAATATAGGTGTTCAGTTTAATGCAGTTGAGTTCAAAAAGTCTACTGAAGAGCTAAGATTGCGTTTCTCTAATGGGGAAATGCAAAGAGTTAAGAAAACTATAAGAAAGAAGCGGAAAATGGATTCTAATGGACAAGAACCCTCTGCTCAACATGAAGAAGAGGGGGGAATGCGCTATAGATTTTATGAAAGTGCTTCTGCGAGAAAAAGAACTGTGACAGCTGAAGAAAGAGAAAGGGCAATCAATTCAGCAAAAGCATTTGAACCGGCTAATCCTTTCTGTCGGGTTGTCTTGCGACCCTCCTATTTATACAGGGGATGCATAATGTATTTGCCATCCTGTTTTGCAGAAAAGCATTTGAATGGGGTTTCAGGATTCATTAAACTGCAGATCTCTTCTGATGGAAAACAGTGGCCTGTCCGCTGCCTTTACAGAGGAGGGAGAGCAAAGTTAAGCCAAGGGTGGTTTGAATTTTCACTGGAAAATAATTTAGGCGAAGGGGATGTCTGTGTTTTTGAACTTCTTAGAATGAAGGAGGTAGTGTTGAAAGTTACTATATTTCGTGTAACTGAGGACGCAGGATTGATGAGCACTCCTATGCATCAACACCACAACGTCAGCCCAATTAAACTGTTGAATACTCCTATGCCCCAAGCCATCGTGCCGGTGAAACTGATTAGAAACTAG 1272 0.4198 MPRPCFHKLICPSTLQSRQLTIPDNFLRKFGDDLSTVATLTGPDGSVWRVGLKRLGNKSWLIDGWQEFVQRYSIGVGYLLVFRYEGKSSFNVHIFNLATCEITYQSNTRSSNEGTFFPNQHLNFDDLENEDDSIEFLDSSPSSLTPGALQNKAFPGTSALQNLFHGSKLNSINWGDGGNSLSPEGANSQDNQSSRNIGVQFNAVEFKKSTEELRLRFSNGEMQRVKKTIRKKRKMDSNGQEPSAQHEEEGGMRYRFYESASARKRTVTAEERERAINSAKAFEPANPFCRVVLRPSYLYRGCIMYLPSCFAEKHLNGVSGFIKLQISSDGKQWPVRCLYRGGRAKLSQGWFEFSLENNLGEGDVCVFELLRMKEVVLKVTIFRVTEDAGLMSTPMHQHHNVSPIKLLNTPMPQAIVPVKLIRN 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0212 423 ProSiteProfiles B3 DNA-binding domain profile. 5 98 IPR003340 GO:0003677
Lele36g0212 423 SUPERFAMILY DNA-binding pseudobarrel domain 3 100 IPR015300 -
Lele36g0212 423 ProSiteProfiles B3 DNA-binding domain profile. 289 385 IPR003340 GO:0003677
Lele36g0212 423 PANTHER B3 DOMAIN-CONTAINING 3 373 - -
Lele36g0212 423 SUPERFAMILY DNA-binding pseudobarrel domain 282 384 IPR015300 -
Lele36g0212 423 Pfam B3 DNA binding domain 292 384 IPR003340 GO:0003677
Lele36g0212 423 Pfam B3 DNA binding domain 7 95 IPR003340 GO:0003677
Lele36g0212 423 SMART B3_2 6 98 IPR003340 GO:0003677
Lele36g0212 423 SMART B3_2 289 385 IPR003340 GO:0003677
Lele36g0212 423 CDD B3_DNA 287 383 IPR003340 GO:0003677
Lele36g0212 423 MobiDBLite consensus disorder prediction 234 252 - -
Lele36g0212 423 MobiDBLite consensus disorder prediction 175 194 - -
Lele36g0212 423 Gene3D - 266 387 IPR015300 -
Lele36g0212 423 MobiDBLite consensus disorder prediction 229 252 - -
Lele36g0212 423 Gene3D - 1 100 IPR015300 -
Lele36g0212 423 CDD B3_DNA 4 96 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0212 Lele-ChrLele36 1250727 1253802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0212 1 389 B3 DNA Binding Superfamily AT3G18990 51.889 1.68e-130 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele36g0212 B3 2.2e-15 CL0405