Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0129 ATGAGATATTTGCCAATTGGTCAGTTTTCAGGTCATCGGCCTATTAACGCTTTTCCGTCGCCATTCATGGAGTCACCAGCAGTTGGTTTGCTGCCGGCTAAACGACCTGCAGATGGATTTAATTCAGAGAAACACAAAATATTAAAAGTTGTAGACTATAGCAATCCATATGCAATTGCGGACTTGCTTGATGGCCTGAACCACGGAAAATTTGGAAGTGTCACCAAGGAAATAGAGTCCCTTATAGCTCAAAAGATGCGGACATTGAGCCCTATATTTGCAAAAGATCCTGCACTTCTACAGTTTGTGAAAGTGGGAATGAATCGTGATGAAGAAGCTGCTAAGAAAATCATAGATTTGGAGGATAATCCCATGACAAAGACTGCTTCAAAAGCATCATCAACTGTTGTAATTATTGATTCAGATGAGGAAGATGATAGAGATAAGAAACCTTGTCTGCCATTTCAAGAAGTTATACTGCCAAAACCTGTTGTCTGGTCTACTACAAAAGACATAGTTGGGTACCATGGTCCCAATGCACATCTTCCTCCTATTGGGTCTCATGCTGGAAGTCTAGATGTAAAATCTGAACCTTTTCTCATGGGCAAAGACGACATTGGAAAAGATAAAGGTTCTTTTATTGGTGTTCAAGAGGGAGACAGTCCACAGGCTGACACAAAGGATGATGGGCTAGAAGATATTTGGAGGGAGATGTCAATGGCAATAGAATGTTCCAAAGATGTTGATATGGATGCTCCACGTGATGAAGCTGAAAAGGGTGCGGATGACTGTGATCACTCTTATGTTTTAAAAGATGATCTTGGTTATGTTTGTCGTGTTTGTGGGGTTATCAGCAGAGGAATCGAAACCATATTTGAATTCCAGTACAAGGTTAAAAAAAGTACAAGAACTTACATGGCCGATTCACGGAATTCCAAAGAGAGAGCATTGCCTGATGTATCGGGACTTAAATTTGGTGAAGATGGTCTGGTGATATCTGAACTCTCTGCCCACCCCAGGCATATGAAACAAATGAAACCCCATCAAGTTGAAGGATTTAATTTTCTCGTCCGAAACCTTGCGGGTGACAATCCTGGTGGCTGCATCTTGGCCCATGCTCCTGGTTCTGGGAAGACATTCATGATAATCAGTTTCATGCAAAGCTTTCTTGGCAAGTATCCTAATGCCCGACCCCTAGTAGTTCTTCCTAAGGGAATATTGGCTATTTGGAAAAAGGAGTTTCAAACATGGCAAGTGGAGGACATTCCACTCTATGATTTTTACTCCGCTAAGGCGGACAGTCGATCTCAGCAGCTGGAAGTTTTAAAAAAGTGGGTAGAGCAGAAGAGTATTCTTTTCCTAGGATATAAACAATTCTCTTCAATTGTCTGTGATACTGGAACTAGCCAGGTATCCACATCTTGCCAAGAGATATTGCTTAGGGCTCCTTCTATTCTCATTTTAGATGAGGGACACACACCCAGGAATGACAATACTGACATAGTTCAGTCCCTTACCAAAGTGCAAACACCTCGGAAAGTTGTACTGTCAGGAACCCTGTATCAAAATCATGTCAAAGAGGTGTTTAACATTTTGAACATTGTGCGTCCACCAAATTTTCTACGCTTACAAACATCTCGACCTATTGTCAGGCGCATTAAGAGTAGAGTACATGTACCTGGTGTGAAAGATTTCTGTGACTTGGTGGAGAACACATTGCAGAAGGACCCTGATTTTAAAAGGAAAGTGGCTGTCATTCAAGATTTGCGTGAGATGACAAGCCAGGTACTTCATTACTACAAGGGAGATTTTCTTGATGAGCTTCCCGGCCTTGTAGATTTCGCAGTTGTGCTCAATCTTAGTCCCCGACAGAAGCACGAAGTCCATAAACTAAAGCACTTATCCAGAAAGTTTAAGATAAGTTCTGTAGGAAGTGCGGTTTATCTTCACCCTAAATTAAAGCCTATTGCAGAAAATTGTGCTGAGAATTCTGCTGTATCTGATCACATGATGGATGAGATGATAGAGAGTCTAGATCTGGAAGATGGGGTGAAGTCAAAATTCTTTCTTAAAATGCTGAGCCTATGTGAATCAAGTGGGGAGAAGCTTCTAGTCTTTAGCCAATATCTCTTGCCTTTGAAGTATTTAGAAAGGTTAACTGTGAAACGGAAGGGATGGAGTCCTGGAAAAGAGATATTTGTCATATCAGGTGAATCCAGCTCTGAACAAAGAGAATGGTCCATGGAGCAGTTTAACAATTCACCAGATGCTAAAGTCTTCTTTGGCTCAATCAAGGCATGTGGAGAAGGCATCTCTTTGGTTGGGGCATCACGAATAATTATTTTGGATGTTCATCTAAATCCATCAGTTACACGCCAAGCAATTGGCCGTGCATTCCGACCTGGTCAGACAAGGAAAGTCTTTGCATATCGGTTGATAGCTGCTGATTCTCCTGAACAGGAAGACCATGATACTTGTTTCAAGAAGGAATTGATATCAAAAATGTGGTTTGAATGGAATGAGTATTGTGGTTTTCATGATTTTGAAGTTGAGACTGTTGATGTGGAACAATGTGGTGATGACTTTCTGCAAACTCAATTGATAAGGGATGATATAAAAATTCTGCATAGAAGGTGCTTGAAACCAAGGGCATGGGGATGTATGTTATTGTTCCCCATTCTTCGATTTGGTGAAGACGCTGCTACAAAGGGATGGCTTTAA 2721 0.4127 MRYLPIGQFSGHRPINAFPSPFMESPAVGLLPAKRPADGFNSEKHKILKVVDYSNPYAIADLLDGLNHGKFGSVTKEIESLIAQKMRTLSPIFAKDPALLQFVKVGMNRDEEAAKKIIDLEDNPMTKTASKASSTVVIIDSDEEDDRDKKPCLPFQEVILPKPVVWSTTKDIVGYHGPNAHLPPIGSHAGSLDVKSEPFLMGKDDIGKDKGSFIGVQEGDSPQADTKDDGLEDIWREMSMAIECSKDVDMDAPRDEAEKGADDCDHSYVLKDDLGYVCRVCGVISRGIETIFEFQYKVKKSTRTYMADSRNSKERALPDVSGLKFGEDGLVISELSAHPRHMKQMKPHQVEGFNFLVRNLAGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILAIWKKEFQTWQVEDIPLYDFYSAKADSRSQQLEVLKKWVEQKSILFLGYKQFSSIVCDTGTSQVSTSCQEILLRAPSILILDEGHTPRNDNTDIVQSLTKVQTPRKVVLSGTLYQNHVKEVFNILNIVRPPNFLRLQTSRPIVRRIKSRVHVPGVKDFCDLVENTLQKDPDFKRKVAVIQDLREMTSQVLHYYKGDFLDELPGLVDFAVVLNLSPRQKHEVHKLKHLSRKFKISSVGSAVYLHPKLKPIAENCAENSAVSDHMMDEMIESLDLEDGVKSKFFLKMLSLCESSGEKLLVFSQYLLPLKYLERLTVKRKGWSPGKEIFVISGESSSEQREWSMEQFNNSPDAKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQTRKVFAYRLIAADSPEQEDHDTCFKKELISKMWFEWNEYCGFHDFEVETVDVEQCGDDFLQTQLIRDDIKILHRRCLKPRAWGCMLLFPILRFGEDAATKGWL 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0129 906 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 334 540 IPR027417 -
Lele36g0129 906 SMART ultradead3 341 545 IPR014001 -
Lele36g0129 906 Pfam SNF2-related domain 365 630 IPR000330 GO:0005524|GO:0140658
Lele36g0129 906 Gene3D - 609 854 IPR027417 -
Lele36g0129 906 Gene3D - 323 559 IPR038718 -
Lele36g0129 906 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 221 880 IPR044567 GO:0080188
Lele36g0129 906 SMART helicmild6 714 802 IPR001650 -
Lele36g0129 906 CDD SF2_C_SNF 685 813 - -
Lele36g0129 906 Pfam Helicase conserved C-terminal domain 691 801 IPR001650 -
Lele36g0129 906 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 483 840 IPR027417 -
Lele36g0129 906 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 688 856 IPR001650 -
Lele36g0129 906 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 359 538 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0129 Lele-ChrLele36 793676 801359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0129 699 820 RAD5 or RAD16-like Gene Family AT5G43530 36.885 5.47e-15 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Lele36g0129 SNF2_N 3.3e-21 CL0023