Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0122 ATGGAAGAAGGAAGAGAAGTAGTGAGGAGCAGTACTGGGAATAAGTGCCAAGACTGCGGGAACCAGGCGAAGAAAGGTTGTGAGTACAAGAGATGTAGAAGTTGCTGTAACAGCAAAGGGTTTGAGTGTGAAACACATGTTCACAGCACTTGGGTTCCTGTAGATCATAGAAGACGCCATAGAGAGCATCATCATCCTCATTTCCCTAAAAGGCACAAACCCTATCCACCAGACAAAAAGGATCAGTTCAAGTTTCCAGGTTTGGTGAGTATGACGGCGATGTTTCGGTGCGTCCAAGTGAGATCAAATGATGATTGGGTGAATGAATCTGCGTACCATACGGCACTGAGGATTGGAGGGCATGTGTTTTGTGGTCTTCTTTATGATCAAGGCCCTTCTCATCAACAAGACCATGGAGTGGCTGAGAGTTCTTCAGTTCCTCTTCTTCAGCATAACAATCTAATAAAAAACGTAGCAACACAGACGACCCATATTGATGCTGCAACAATGGCTCCTCCATTATTATCATCTTCTTCTTCTTCTGCCCGTGACTCTATCTTTCATTATCCAACATATCCTTTTCCCCGACCTCCTACGCCTTATTTCTCTAACCCCCAACCTTAG 624 0.4471 MEEGREVVRSSTGNKCQDCGNQAKKGCEYKRCRSCCNSKGFECETHVHSTWVPVDHRRRHREHHHPHFPKRHKPYPPDKKDQFKFPGLVSMTAMFRCVQVRSNDDWVNESAYHTALRIGGHVFCGLLYDQGPSHQQDHGVAESSSVPLLQHNNLIKNVATQTTHIDAATMAPPLLSSSSSSARDSIFHYPTYPFPRPPTPYFSNPQP 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0122 207 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 10 185 IPR007818 GO:0003700|GO:0006355
Lele36g0122 207 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 15 56 IPR006510 -
Lele36g0122 207 MobiDBLite consensus disorder prediction 57 77 - -
Lele36g0122 207 MobiDBLite consensus disorder prediction 57 73 - -
Lele36g0122 207 Pfam Domain of unknown function (DUF702) 78 133 - -
Lele36g0122 207 Pfam Domain of unknown function (DUF702) 13 65 - -
Lele36g0122 207 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 84 132 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0122 Lele-ChrLele36 741661 742464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0122 16 206 C2H2 Transcription Factor Family AT3G51060 36.937 7.88e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele36g0122 DUF702 1.3e-15 No_clan