Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0118 ATGCCTCCCAAGTTCAGAATCATAATTCAGAGCCCACACTCGACAGTCGACACTATTCAGAAAGAAATGAAGATACTTTGTGATGTGTGTGACAGATCGGAGGCCTCTCTCTTCTGTCCCTCCGACGAAGCTGCTCTCTGCTTCGCCTGTGATCGTACCATCCACCATGCCAACAAGCTCTCTCGCAAACATTCTCGCTTCTCTCTTCAACACCCTTCCTCCAATTCCTCTCCCCTCTGCGATATCTGCCAAGAGAGGAGAGCGTATGTGTTTTGCCAAGAAGACAGAGCGATATTTTGCAGAGAATGCGATGTTCCGGTTCACAGAGCCAGCGAGCATACTCGGAAGCATAACAGGTTTCTTCTCGCCGGTGTGAAGCTCTCTGCTTCTATCTCAAGCAATAATGAATCTCAATCTAATAACATGAAGAGACACAGATCATCGTCATCATCAGTTTCAAGTGAGAATGCCGGTTCTTCAATGGTGATGAGTAGTTCTTTATTAGCCTCATCAGCGACGGCTGGTTTTGGCAACGTGGAAGATCAGTGCATAATTAGTGATACCTGTTCAGTTTCAACAAGCAGCATTTCAGAATACTTGATCGAGAACATACCTGGTTACTGCTTTGAAGATCTTCTTGATGCTTCTTCATTCCCTCCACTTAATGGTTTCTGTAAGAAGTATGAGAACATGCCAGCATTTGAGGAGCAGGATATTGAAGCAAGTACGTATTTGTTTAGAAGCTCGAGATGA 753 0.4489 MPPKFRIIIQSPHSTVDTIQKEMKILCDVCDRSEASLFCPSDEAALCFACDRTIHHANKLSRKHSRFSLQHPSSNSSPLCDICQERRAYVFCQEDRAIFCRECDVPVHRASEHTRKHNRFLLAGVKLSASISSNNESQSNNMKRHRSSSSSVSSENAGSSMVMSSSLLASSATAGFGNVEDQCIISDTCSVSTSSISEYLIENIPGYCFEDLLDASSFPPLNGFCKKYENMPAFEEQDIEASTYLFRSSR 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0118 250 Gene3D Classic Zinc Finger 23 122 - -
Lele36g0118 250 CDD Bbox1_BBX-like 26 69 - -
Lele36g0118 250 ProSiteProfiles Zinc finger B-box type profile. 75 122 IPR000315 GO:0008270
Lele36g0118 250 FunFam B-box zinc finger protein 21 23 120 - -
Lele36g0118 250 SMART bboxneu5 22 69 IPR000315 GO:0008270
Lele36g0118 250 SMART bboxneu5 75 122 IPR000315 GO:0008270
Lele36g0118 250 CDD Bbox1_BBX-like 79 122 - -
Lele36g0118 250 PANTHER B-BOX ZINC FINGER PROTEIN 22 23 234 - -
Lele36g0118 250 Pfam B-box zinc finger 25 65 IPR000315 GO:0008270
Lele36g0118 250 Pfam B-box zinc finger 77 115 IPR000315 GO:0008270
Lele36g0118 250 MobiDBLite consensus disorder prediction 132 157 - -
Lele36g0118 250 ProSiteProfiles Zinc finger B-box type profile. 22 69 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0118 Lele-ChrLele36 710529 712175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0118 23 217 C2C2-CO-like Transcription Factor Family AT4G39070 52.217 2.77e-58 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Lele36g0118 zf-B_box 2.3e-07 No_clan