Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0107 ATGCGAACACTTTGTGATGTTTGTGAGAGCGCTGCAGCGATCATCTTCTGTGCTGCAGACGAGGCTGCTTTATGCCCTGCATGTGACGAAAAGGTCCATACATGCAACAAGCTTGCTAGTAAACATGTGCGAGTTGGGCTGGCTGACCCCACTGATGTTCCTCGCTGTGACATATGCGAAAATGCACCTGCTTTCTTTTACTGTGAGATAGATGGTAGTTCGTTGTGTCTGCAATGTGACATGATAGTACATGTTGGTGGTAAAAGAACCCATGAAAGATATCTTCTATTGAGGCAAAGAGCTGAGTTTCCAGGTGACAAACCTGGTCGATTGGAAGAACTAGGGCTGCAACCCCTTGATCAAAATCAATTAAAGAAGGACCAAAGTCATCCCCTTAAGCTAATAACAAGAGATGGCCTGCATAACCATAGGGTCTCACCTGCCCCAATTCTAGAAAATAATGGTGATCATGGAAAGATGGATAAAAAACTAATTGATCTTAATACTAGACCACAACGGTTAAATGGACCAACATCGAACAATCAGGAACCTGAACAGGAACCGGCCATGGATATGTCAAATGGCAATAACAATGAATCTGTGGTACCATTAGGATCCTTCAAACGTGAGGCTGAGAAGAAATAA 645 0.4341 MRTLCDVCESAAAIIFCAADEAALCPACDEKVHTCNKLASKHVRVGLADPTDVPRCDICENAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHERYLLLRQRAEFPGDKPGRLEELGLQPLDQNQLKKDQSHPLKLITRDGLHNHRVSPAPILENNGDHGKMDKKLIDLNTRPQRLNGPTSNNQEPEQEPAMDMSNGNNNESVVPLGSFKREAEKK 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0107 214 SMART bboxneu5 1 47 IPR000315 GO:0008270
Lele36g0107 214 SMART bboxneu5 51 96 IPR000315 GO:0008270
Lele36g0107 214 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Lele36g0107 214 FunFam B-box zinc finger protein 19 2 92 - -
Lele36g0107 214 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
Lele36g0107 214 Pfam B-box zinc finger 53 92 IPR000315 GO:0008270
Lele36g0107 214 CDD Bbox1_BBX-like 56 96 - -
Lele36g0107 214 MobiDBLite consensus disorder prediction 168 214 - -
Lele36g0107 214 MobiDBLite consensus disorder prediction 171 203 - -
Lele36g0107 214 Gene3D Classic Zinc Finger 2 95 - -
Lele36g0107 214 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Lele36g0107 214 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 161 - -
Lele36g0107 214 CDD Bbox1_BBX-like 4 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0107 Lele-ChrLele36 636189 638100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0107 1 213 C2C2-CO-like Transcription Factor Family AT4G38960 60.648 1.10e-82 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Lele36g0107 zf-B_box 3.5e-06 No_clan