Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0087 ATGGATTTATCAAACTCCAAAGTTGCAGACGAACAATTATCCAGTCACTCCGATAGCATTTATGGGGAAATAAGTTTGGTTGGCAAGAAACCTTCATGGTCCAAACGTCTTTCTTCCATAGGAGCCCATGATGCTTTCAGACCAGAGGTATGGAGGGCAGGTTTGACAGAGTTAGTAGCAACAGCATTACTAATGTTCACCCTCACAACCTCCATTATTGCATGCTTGGACTCAAATGAGGTTGATCCAAAGCTTCTTGTCCCTTTTGCAGTATTCATAATAGCCTTCCTCTTCTTAATGGTCACCGTGCCTCTCTCTGGAGGACACATGAGCCCAGTTTTCACCTTCATCGCTGCCTTAAAGGGAGTCATAACTCTCACACGTGCTCTCATTTACTTAATATCCCAATGCATTGGCTCCATTATTGGCTTTCTCATCATTAAGACCGTGATGGACAAAAGATTAGCACATATATATAACTTAGGAGGCTGTGCTATCAGTGGTTTGAAGCAGCAAGAAGCTCTGTTACTGGAAGTTTGTTGTACTTTTGTGGTTTTGTTTGTGGCAGTGACCATTGCTTTTGACAAGAGAAGGTCCACTCAATTGGGGCTGCCAGTGCTGTGTTTGGTGATTGCAGGAGCCATGGCGTTGGCAGTTTTTGTGTCTATTGTTGTGACTGGACGGGCTGGATATGCTGGTGTGGGCCTAAACCCAGCAAGGTGTTTGGGCCCAGCGTTACTTCAAGGAAGCCCATTGTGGCATGGACATTGGGTTTTTTGGGTTGGGCCCTTCTTAGCCTGCATTCTCTATCATATTGTCTCCACGAACTTACCCAGAGAGACCAAACACCATTCATCTTCATATAAGATAATAATGCCATGCCTTAATGAAGCATATGCCTTTATACCCTTGAATCGACGCTTCATGGATTTACAGTCGCTTGACTCTCCAGTCTTCTCAGAAGATCAGGGTAGCAGGTCCGTTGAAAACCATGAGGCAAACAAGTCTTTAGGGTCGAAGCTTCTTGTTTCCATTGGTGCTCATGAATTCTTCAGTCCAGAGATGTGGAAGGCTGCTTTGACAGAGCTAACAGCAACAGCATGCTTACTGTTCACATTGACCACTTCCATTATAGCTTGCTTGGATTCTCACGAGACTGATCCAAAGCTTCTTGTTCCTTTTGCAGTATTCATCATAGCTTTCCTCTTCTTACTGGTCACTGTCCCTCTAACTGGAGGCCACATGAGCCCAGTTTTCACTTGTATCGCTACTCTTAAGGGTTTTATAACTATTTCTCGTGCTCTCATCTACATATTCGCACAATGCATTGGCTCAATCATTTGCTTCTTGATCATTAAGAGTGTCATGCTTCAAAGACTTGCAGATTCATATTACTTAGGAGGCTGTGCAATTAGTGACATGAGGAAAGAAAAAGCTTTGTTGTTAGAATTTTGCTGCACATTTGTGGTTCTTTTCGTGGGGGTTACGGTGGCTTTTGACAAGAAGAGGTCTAAGGATTTGGGTTTGCCAATGGTGTGTGTGGTGGTGGCAGCGGCCATGGCTGTTGCAGTATTTGTGTCTATTACTGTGACCGGGCAGGCTGGGTATGCTGGTGTGGGCTTGAATCCAGCAAGATGCTTGGGCCCTGCAATGCTTCAAGGAGGCCCACTCTGGAATGGACATTGGATATTCTGGGTCGGGCCGTTCTTGGCATGTCTTTTGGATTATGTTGTGTCCATCAATTTACCAAAGAAACTCTTGTATGCCTAA 1770 0.4463 MDLSNSKVADEQLSSHSDSIYGEISLVGKKPSWSKRLSSIGAHDAFRPEVWRAGLTELVATALLMFTLTTSIIACLDSNEVDPKLLVPFAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALKGVITLTRALIYLISQCIGSIIGFLIIKTVMDKRLAHIYNLGGCAISGLKQQEALLLEVCCTFVVLFVAVTIAFDKRRSTQLGLPVLCLVIAGAMALAVFVSIVVTGRAGYAGVGLNPARCLGPALLQGSPLWHGHWVFWVGPFLACILYHIVSTNLPRETKHHSSSYKIIMPCLNEAYAFIPLNRRFMDLQSLDSPVFSEDQGSRSVENHEANKSLGSKLLVSIGAHEFFSPEMWKAALTELTATACLLFTLTTSIIACLDSHETDPKLLVPFAVFIIAFLFLLVTVPLTGGHMSPVFTCIATLKGFITISRALIYIFAQCIGSIICFLIIKSVMLQRLADSYYLGGCAISDMRKEKALLLEFCCTFVVLFVGVTVAFDKKRSKDLGLPMVCVVVAAAMAVAVFVSITVTGQAGYAGVGLNPARCLGPAMLQGGPLWNGHWIFWVGPFLACLLDYVVSINLPKKLLYA 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0087 589 SUPERFAMILY Aquaporin-like 348 574 IPR023271 -
Lele36g0087 589 Gene3D Glycerol uptake facilitator protein. 320 582 IPR023271 -
Lele36g0087 589 Gene3D Glycerol uptake facilitator protein. 25 284 IPR023271 -
Lele36g0087 589 PANTHER AQUAPORIN-LIKE 29 287 - -
Lele36g0087 589 Pfam Major intrinsic protein 352 573 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele36g0087 589 Pfam Major intrinsic protein 48 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele36g0087 589 PRINTS Major intrinsic protein family signature 177 195 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele36g0087 589 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele36g0087 589 PRINTS Major intrinsic protein family signature 218 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele36g0087 589 PRINTS Major intrinsic protein family signature 91 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele36g0087 589 PRINTS Major intrinsic protein family signature 257 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele36g0087 589 PRINTS Major intrinsic protein family signature 128 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele36g0087 589 SUPERFAMILY Aquaporin-like 45 271 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0087 Lele-ChrLele36 514013 517107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0087 349 585 Major Intrinsic Protein MIP AT3G61430 28.063 3.72e-19 86.3