Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0078 ATGAGTCAGCTAGAACACAAAACTTCCTCGTCGCAGTTTAATATATTATCCCTCTCTAAATTTCGTCCGACACCTCTATTCTTGCGTTCCTTTTACCCGATTCCGACCGAATTCCGGGTTGAACCCATGGATTGTACAGCTGCTAGAAAAACTCAAAAGGCTGACAGAGAAAAACTGAGGAGGGACCGGCTCAATGAACAGTTCGTAGAATTGGGTAGTATTTTAGATCCTGATAGGCCCAAAAATGACAAAGCAACCATTCTCGCTGATACAATCCAATTGCTGAAGGACCTTACTTCGCAAGTTAGTAAACTCAAAGAGGAATATGCTATGCTGACTGAAGAATCCCAGGAGTTGACTCAGGAGAAAAACGATCTTAGGGAAGAGAAGTCTTCTCTTAAATCAGACATTGAGAGCTTGAATAACCAATACCAGCAACGACTCAGGACTATGTTCCCTTGGTGTGCAATGGATCACTCAGTTATGATGGCTCCACCTTCATATCCATATCCAGTGCCAGTGCCAGTGCCAGTCCCTCCTGGTCCAATTCCCATGCATCCACCCATGCAGCCATACCCCTTCTTTGCAAATCAAAATCCTGGGGTCATCCCAAATCCGTGTTCAACATTCGTTCCTTATCTAGCCCCTAATACTCTTGTCGAACATCAGTCCACACAATATTTTACCCCCCCACTTCCTCCCGGTGGCCATTCCCATGCATCAGGAACACAAGATTCCAGAAACAAATCTTCCACGGAGAGCAAGGTTGAAAATGATGAATGTGCTAATGATGTCACCACAGACCTGGAGTTGAAAACTCCTGGATCTACGACAGACCAGGAGATGTCATCTGGGCAAAGAAAATCCAGCAGGTTGTCCACGAACACAGAAGGGAGTTCATCCCGTAGGTGTTCTTCCTCTCACAGCGTACAGGATAGCTCATCAAGTAGCGTAGTTGGCAGCAGAAAAGCTAATGAATGA 981 0.4546 MSQLEHKTSSSQFNILSLSKFRPTPLFLRSFYPIPTEFRVEPMDCTAARKTQKADREKLRRDRLNEQFVELGSILDPDRPKNDKATILADTIQLLKDLTSQVSKLKEEYAMLTEESQELTQEKNDLREEKSSLKSDIESLNNQYQQRLRTMFPWCAMDHSVMMAPPSYPYPVPVPVPVPPGPIPMHPPMQPYPFFANQNPGVIPNPCSTFVPYLAPNTLVEHQSTQYFTPPLPPGGHSHASGTQDSRNKSSTESKVENDECANDVTTDLELKTPGSTTDQEMSSGQRKSSRLSTNTEGSSSRRCSSSHSVQDSSSSSVVGSRKANE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0078 326 PANTHER TRANSCRIPTION FACTOR BHLH121 39 324 IPR044579 GO:0003700|GO:0055072
Lele36g0078 326 Coils Coil 88 143 - -
Lele36g0078 326 Coils Coil 47 67 - -
Lele36g0078 326 MobiDBLite consensus disorder prediction 115 134 - -
Lele36g0078 326 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 98 IPR011598 GO:0046983
Lele36g0078 326 MobiDBLite consensus disorder prediction 225 326 - -
Lele36g0078 326 MobiDBLite consensus disorder prediction 269 326 - -
Lele36g0078 326 Pfam Helix-loop-helix DNA-binding domain 49 98 IPR011598 GO:0046983
Lele36g0078 326 Gene3D - 47 131 IPR036638 GO:0046983
Lele36g0078 326 MobiDBLite consensus disorder prediction 250 266 - -
Lele36g0078 326 CDD bHLH_AtILR3_like 53 127 - -
Lele36g0078 326 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 119 IPR036638 GO:0046983
Lele36g0078 326 SMART finulus 54 104 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0078 Lele-ChrLele36 485985 488144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0078 41 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 61.111 1.96e-94 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele36g0078 HLH 2.1e-09 No_clan