Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0076 ATGCCAACCCATAAAAGACGAGTCACAAGATATACCTTTCTGCTCGGATTCCCTCTAACCGTGGTCAATTCGAAACTTAACTACGGTTACTGTACATCCGCTACAATTCTGCCACGTGTTTCAATCCAACGGTCACTTCCTAAGATATCAGGCACAGAGGGGAAAATGGCGAACCCTAAGGTCTACTTCGACATAACCATCGGTGGCCAGACCGCCGGTCGCGTAGTCATGGAGCTCTTTGCGGATACCACACCAAAGACCGCCGAGAACTTCCGTGCCCTCTGCACCGGAGAGAAGGGAGTCGGCCGCAGTGGAAAGCCCCTTCACTACAAGGGCTCCATCTTCCACCGTGTGATCCCCGACTTCATGTGCCAGGGAGGCGACTTCACCGCCGGGAACGGCACCGGCGGCGAGTCCATTTACGGCAGCAAGTTCGAGGACGAGAACTTTGTGAGGAAGCACACCGGTCCCGGAGTGCTTTCCATGGCCAATGCCGGACCCGGTACCAACGGGTCGCAGTTCTTCATCTGCACGGCCCAAACGTCGTGGCTGGACGGGAAGCACGTGGTGTTCGGTCAGGTGGTGGAAGGCATGGATGTGGTGAGGGAGGTGGAGAAGGTCGGGTCAAGGTCTGGGAAGACGTCGAAGCCAGTGGTGATTGCCGACTGCGGTCAACTCTCTTAA 684 0.5643 MPTHKRRVTRYTFLLGFPLTVVNSKLNYGYCTSATILPRVSIQRSLPKISGTEGKMANPKVYFDITIGGQTAGRVVMELFADTTPKTAENFRALCTGEKGVGRSGKPLHYKGSIFHRVIPDFMCQGGDFTAGNGTGGESIYGSKFEDENFVRKHTGPGVLSMANAGPGTNGSQFFICTAQTSWLDGKHVVFGQVVEGMDVVREVEKVGSRSGKTSKPVVIADCGQLS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0076 227 FunFam Peptidyl-prolyl cis-trans isomerase 55 227 - -
Lele36g0076 227 SUPERFAMILY Cyclophilin-like 56 226 IPR029000 -
Lele36g0076 227 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 115 127 IPR002130 GO:0000413|GO:0003755
Lele36g0076 227 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 185 IPR002130 GO:0000413|GO:0003755
Lele36g0076 227 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 158 173 IPR002130 GO:0000413|GO:0003755
Lele36g0076 227 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
Lele36g0076 227 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 79 94 IPR002130 GO:0000413|GO:0003755
Lele36g0076 227 CDD cyclophilin_ABH_like 59 224 - -
Lele36g0076 227 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 62 225 IPR002130 GO:0000413|GO:0003755
Lele36g0076 227 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 60 226 - -
Lele36g0076 227 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 110 127 IPR020892 GO:0003755|GO:0006457
Lele36g0076 227 Gene3D - 48 227 IPR029000 -
Lele36g0076 227 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 63 224 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0076 Lele-ChrLele36 478690 479465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0076 71 207 U-box Gene Family AT5G67530 47.826 4.88e-29 112