Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0055 ATGGGAAGGTCTCCTTGCTGCGAGAAAGCTCACACTAACAAAGGAGCATGGACCAAGGAAGAAGACGATCGTCTTGTTGCTTATATTCGAGCTCACGGCGAGGGCTGCTGGCGCTCTCTCCCCAAAGCCGCCGGCCTCCTCCGTTGTGGCAAGAGCTGCCGTCTCCGATGGATCAACTACCTCCGTCCCGACCTCAAACGCGGCAATTTTACTGAAGAAGAAGATGAGCTCATCATCAAGCTCCACAGTCTCCTCGGCAATAAGTGGTCGTTGATAGCCGGGAGATTACCGGGAAGAACGGACAACGAGATAAAGAATTACTGGAATACTCATATAAGAAGGAAGCTTCTGAGCAGAGGAATTGACCCTACAACTCACAGGCCTCTCAACGATGCTCCTCAGAACCAATCTCATGCCTCATCTGCTTCTGCTGCTAAACAGCACGAGTCGGAGATTCTGATTACGGATACAGATGCGAATTCCAAACGACCCGGCGTCTTTGAAGTGTGCCCCGACTTGAACCTTGAGCTAACCATCAGTCTTCCCCATCATCATCAGCATCAGCAACCAGATCAAACATCGCTCAAGAGCATTAATAGTGGGAGCAGTACGGCTGGCGATGGTTATGATTTCTTGGGATTGAAAAGCAGGGGTTTGGATTGCAGGAGCAGCGTAACCCAAATAGATTGGAGAGCACTCAGAGAATGA 708 0.5028 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPTTHRPLNDAPQNQSHASSASAAKQHESEILITDTDANSKRPGVFEVCPDLNLELTISLPHHHQHQQPDQTSLKSINSGSSTAGDGYDFLGLKSRGLDCRSSVTQIDWRALRE 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0055 235 Gene3D - 68 153 - -
Lele36g0055 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele36g0055 235 SMART sant 66 114 IPR001005 -
Lele36g0055 235 SMART sant 13 63 IPR001005 -
Lele36g0055 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele36g0055 235 FunFam MYB-related transcription factor 13 66 - -
Lele36g0055 235 FunFam Myb transcription factor 68 137 - -
Lele36g0055 235 MobiDBLite consensus disorder prediction 128 149 - -
Lele36g0055 235 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele36g0055 235 Gene3D - 14 66 - -
Lele36g0055 235 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Lele36g0055 235 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 184 - -
Lele36g0055 235 CDD SANT 16 61 IPR001005 -
Lele36g0055 235 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele36g0055 235 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele36g0055 235 MobiDBLite consensus disorder prediction 121 149 - -
Lele36g0055 235 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele36g0055 235 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0055 Lele-ChrLele36 390211 391165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0055 1 217 MYB Transcription Factor Family AT4G38620 59.108 1.05e-98 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele36g0055 Myb_DNA-binding 4.3e-14 CL0123