Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0045 ATGCACCGAGGAAGGAAGGAAGCACTTGTATTGCAGTTGGTTTCCTTCCAAAATGACAGCAGCTTTAAGGACCACACCGTTGTCTTTCTAATGGAAACCTTTCCTCTCTATCCAATTGTCGTTTTCCCAGAGAGAATCCCAATCCCTCCTTCGTCAAACAAACATTGGGCTCTTAGTTCAAGAGCCAACTCTGTGTCTGAAGGCTACAGCAAGGGTTCTGCTCTGGGTGCTGAGATTATCGGCACCTTTGTGCTCGTCTACACCGTCTTCTCCGCCACTGACCCCAAGAGAACTGCCCGTGACTCCCATGTTCCCGTTCTGGCTCCACTGCCAATTGGGTTTGCTGTTTTCATGCTTCTTTCGGCTACCATTCCCATCACCGGAACCGGCATTAACCCAGCAAGGAGCTTTGGTGCTACTGTTATCTACAACAACGACCAAGTTTGGGACGACCATTGGATCTTCTGGGTTGGTCCATTTGTGGGAGCAATGGCGGCTGCAGCGTACCACCAATACATACTGAGGGCAGCAGCAATCAAGGCGCTGGTGCAGTTCCGTGGGAAAAAAACATTTATAAGCTGCGTTTGGTTTTATCCAATACTTGGAAAGGTTTACTAG 618 0.4903 MHRGRKEALVLQLVSFQNDSSFKDHTVVFLMETFPLYPIVVFPERIPIPPSSNKHWALSSRANSVSEGYSKGSALGAEIIGTFVLVYTVFSATDPKRTARDSHVPVLAPLPIGFAVFMLLSATIPITGTGINPARSFGATVIYNNDQVWDDHWIFWVGPFVGAMAAAAYHQYILRAAAIKALVQFRGKKTFISCVWFYPILGKVY 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0045 205 Pfam Major intrinsic protein 60 170 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele36g0045 205 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 58 178 IPR034294 -
Lele36g0045 205 PRINTS Major intrinsic protein family signature 77 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele36g0045 205 PRINTS Major intrinsic protein family signature 113 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele36g0045 205 PRINTS Major intrinsic protein family signature 153 173 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele36g0045 205 Gene3D Glycerol uptake facilitator protein. 40 191 IPR023271 -
Lele36g0045 205 SUPERFAMILY Aquaporin-like 47 174 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0045 Lele-ChrLele36 342756 345962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0045 58 190 Major Intrinsic Protein MIP AT2G16850 83.459 1.13e-76 230