Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0025 ATGGATTCCCTCAAAAAATCCTTCAAGTCCTATTATTCTTACAGACATCGCACTGACGCCGACTCCGGCCACGAACAGCTCCCCATTCTCCTCGATCAAGAAACTCCCGACGATCATCTTCGTCCCCCTCACCTTACTACTCCATCATCCATGACCTCCACTACTCCCAACCCACATCGCCCCGACGTTTTTGTTAAAATCGACGAAGATGACTCGAGAGGTCCCTCAGTGCAGCAGGGTAGCAAGATTTGGAGAGAAACTAGCTATGACTTCTTGAACAATGCAGACGTGAGCAAGAGTGTCAGTGATGGGAGTGCTGGCGCCAGTACCAGTGGTAATGACGAGGATAGCTTTGATTTCCGGCATCATGGGCAGGGTTCCGAGGATCCACCTTCCATGCTCATTGGTAAGTTCTTGCACAAACAGAAAGCTTCTGGGGACATGTCGCTGGATATGGATTTAGAAATGGAGGAGTTCCAGCATGACTACAAATTGCCTCCGGTGGAAGAGTCTCCGCAGCTCAACCGCATTTCCAAGGACCTCAAAGTCTCGTTCGAGGAACCCACTTCCAATGTTGTTGAGGCGGCAACTGATACCGTTAGACGAAGGTCCAAGGACTCGCCGGTTCAAACCGAAGTTCATAAATCGCCGCAACGCGATCAACATGGATCGCCGGCTATCGCTCAGAGCGGTAATGCTGCTGCGGGAGATGGCGAGGTGGTAAGATGTACCTCCAACGCCTCTTATGAAAGGAATCTTTCGTTGCAGAGGAAATCTGCTCTGCTGAAGGCCAGAAATAAGTCAAGATTGTTGGACCCGCCGGAAGAGCCAGACAGAAGGTCTGGTCGGTTGGCAAAATCAGGGCAAAAGTTATCGACGATGTTAGGGAAGAAAGGGGAGGACGAGGAAGACGACCCGTTTTTGGAAGAGGACGTACCGGATGAGTTGAAAAAGACCCATTTTAGCATATGGGTTCTTCTTGAGTGGTTGAGTTTGATTTTGTTTGTTGCCGCGTTTGCATGCACGCTGAGTATCCCAGTTTTGAGGAACAAGATTCTCTGGAAGCTCCAGTTATGGAAATGGGAGGTGATGATCCTGGTTCTAATTTGTGGTCGGTTGGTTTCTGATTGGGTAATTCGAATTTTGGTGTTCTTTATCGAACGAAATTTCCTTTTGCGGAAGAGAGTCCTCTATTTCGTATATGGTGTGAGGAAGGCAGTTCAAAATTGTTTATGGTTGGGATTTGTTTTGATTGCTTGGCATCTATTGTTCGATAAGAAGGTTGAGAGGGCGACTAGAGGCAACAACGCCCTTCAATATGTCACCAAGGTCTTGGTCTGTTTCTTGGTGGGTACTTTGGTACGGTTGGCAAAAACTCTCGTGGTTAAGGTTTTGGCTTCTTCTTTCTATACAACCACATACTTTGATAGGATTCAGGAGTCACTGTTTAATCAATTTGTGATTGAAACACTGTCGGGGCCACCCCTGATCGAAATTCAGAAGTCAGAGGAAGAGGAACAAAAACTTGCTGATGAGGTTCAGAAACTGCAGAATGCTGGGGTTAACATTCCCCCTGAGCTTAGGGCAACTGCCTTCTCCACAACCAAGAGTCCAAGGGCAGCTGCCTTCTCTAGAACTAAGAGTCCAAGGGCGACGAGAAGCGGAATGCTCCAGAAAAGCCCCCGTCTTATAAGTGGAAAGTTTTCCCGTCCACTCTCCCATAAGTCAGATGATGGGATTACTATTGATCACTTGCATAAGCTGAATCCAAAAAATGTCTCTGCCTGGAATATGAAAAGGTTAATGAATATGGTTCGGCACGGCACTCTTTCTACACTGGATGAGCAGATACTTGATTCAGCTCAAGATGATGAAAATGGCACACAGATTAGAAGTGAAAATGAGGCAAAAGCTGCGGCAAAGAAAATATTTCACAATGTTGCCAGGCGGGGTAGCAGGTTCATTTACCTGGAGGATTTGATGCGTTTTATGCGGGAAGATGAAGCTGAAAAAACCATGGATCTCTTCGAAGGAGCATCTGATTCTGGGAAGATCAGCAAATCTGCCTTGAAGAACTGGGTGGTTAATGCCTTCAGAGAGAGGAGAGCACTTGCTTTGACATTGACTGATACCAAAACCGCAGTGAACAAGCTTCATCGAATACTTAATTTTATAGTCAGCATCATTATACTGGTTATTTGGCTATTAATACTGGGAATTGCCACCACCAAATTTCTTCTCTTTGTGAGCTCACAGCTTGTCTTGATCGCGTTTATATTTGGAAATACCTGCAAGACGGTATTTGAAGCAATTATTTTCTTATTTGTCATGCACCCATTTGATGTGGGAGATAGGTGTGAAATCGACGGGGTCCAGATGGTTGTGGAAGAAATGAATATACTGACAACCATATTCTTAAGATATGACAATCAAAAAATAATCATCCCCAACAGCGCCCTTGCTACTAAGGCCATAAATAATTACTACCGGAGTCCTGACATGGGAGATGCTATTGATTTCTTCATACACGTGTCTACCCCGGCTGAAAAGGTTGCACTCATGAAACAAAGAATACATAGCTTCATCGATAACAAGAAGGAGCACTGGTATCCTTCAGCGTTTATAGTCTTCAGGGATCTGGAGCAATTAAACATGATAAGGATATCGATTTGGCCAACTCATAGAATGAACCACCAAGACATGGGAGAAAGGTTTGTCAGAAGATCCCTTCTGATTGAAGAGCTGCTCAGGATATTCCGGGAGCTTGACATCCAGTATCGTCTTCTTCCTCTTGATATTAACATTAGAAGCATGCCTACCACTTCTGAACGGCTTCCACCTAGTTGGGCCACAATCACGATTTATGGAGCTGATATTATGGATCTTGTGCGATATTTCTTGCCACCGCATGTCTTCATTCCTTGTTCTCTCGTTCTAGGCCATGATTAG 2949 0.453 MDSLKKSFKSYYSYRHRTDADSGHEQLPILLDQETPDDHLRPPHLTTPSSMTSTTPNPHRPDVFVKIDEDDSRGPSVQQGSKIWRETSYDFLNNADVSKSVSDGSAGASTSGNDEDSFDFRHHGQGSEDPPSMLIGKFLHKQKASGDMSLDMDLEMEEFQHDYKLPPVEESPQLNRISKDLKVSFEEPTSNVVEAATDTVRRRSKDSPVQTEVHKSPQRDQHGSPAIAQSGNAAAGDGEVVRCTSNASYERNLSLQRKSALLKARNKSRLLDPPEEPDRRSGRLAKSGQKLSTMLGKKGEDEEDDPFLEEDVPDELKKTHFSIWVLLEWLSLILFVAAFACTLSIPVLRNKILWKLQLWKWEVMILVLICGRLVSDWVIRILVFFIERNFLLRKRVLYFVYGVRKAVQNCLWLGFVLIAWHLLFDKKVERATRGNNALQYVTKVLVCFLVGTLVRLAKTLVVKVLASSFYTTTYFDRIQESLFNQFVIETLSGPPLIEIQKSEEEEQKLADEVQKLQNAGVNIPPELRATAFSTTKSPRAAAFSRTKSPRATRSGMLQKSPRLISGKFSRPLSHKSDDGITIDHLHKLNPKNVSAWNMKRLMNMVRHGTLSTLDEQILDSAQDDENGTQIRSENEAKAAAKKIFHNVARRGSRFIYLEDLMRFMREDEAEKTMDLFEGASDSGKISKSALKNWVVNAFRERRALALTLTDTKTAVNKLHRILNFIVSIIILVIWLLILGIATTKFLLFVSSQLVLIAFIFGNTCKTVFEAIIFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTIFLRYDNQKIIIPNSALATKAINNYYRSPDMGDAIDFFIHVSTPAEKVALMKQRIHSFIDNKKEHWYPSAFIVFRDLEQLNMIRISIWPTHRMNHQDMGERFVRRSLLIEELLRIFRELDIQYRLLPLDINIRSMPTTSERLPPSWATITIYGADIMDLVRYFLPPHVFIPCSLVLGHD 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0025 982 MobiDBLite consensus disorder prediction 100 133 - -
Lele36g0025 982 Gene3D - 779 828 IPR023408 -
Lele36g0025 982 MobiDBLite consensus disorder prediction 100 114 - -
Lele36g0025 982 MobiDBLite consensus disorder prediction 534 558 - -
Lele36g0025 982 MobiDBLite consensus disorder prediction 45 59 - -
Lele36g0025 982 Coils Coil 499 519 - -
Lele36g0025 982 MobiDBLite consensus disorder prediction 268 285 - -
Lele36g0025 982 SUPERFAMILY Sm-like ribonucleoproteins 769 828 IPR010920 -
Lele36g0025 982 MobiDBLite consensus disorder prediction 17 82 - -
Lele36g0025 982 MobiDBLite consensus disorder prediction 198 219 - -
Lele36g0025 982 MobiDBLite consensus disorder prediction 193 238 - -
Lele36g0025 982 FunFam Predicted mechanosensitive ion channel 779 828 - -
Lele36g0025 982 MobiDBLite consensus disorder prediction 266 307 - -
Lele36g0025 982 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 37 949 IPR016688 -
Lele36g0025 982 PIRSF Memb_At2g17000 46 954 IPR016688 -
Lele36g0025 982 Pfam Mechanosensitive ion channel 720 924 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0025 Lele-ChrLele36 185148 189422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0025 60 951 Mechanosensitive Ion Channel Family AT1G78610 57.298 0.0 952