Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0020 ATGCCAACTTTGATGCCGTCCGAGCTCCCAATTCAGCTTGACTATGCTATATATATCCCACGTCCACCTCTCTGTTTTCCTCATCACAAAAACATGGCTTTCTTCCTCTGCTGTATATTCCTTCTTGTTTCATTTGCCACTGCTTGCGATCGCTGCGTCCACCAAACTAAGGCTGCCTATTTCTCTGATGACGCTGCTATTTCCTCTGGGGCATGTGGGTATGGCTCCTTGGCGTTGGAATTAAGTGGTGGACACCTTGCAGCTGGTGTTCCTTCCTTGTACAAAAATGGAGCCGGTTGTGGTGCGTGCTTTCAGATAAGATGCAAGAGCTCAAGTCTGTGCAGCAAATCAGGTAGCAGAGTTGTTTTGACCGATCTCAATACCCACAATGAAACTGATTTTGTGCTCAGCAGAAGTGCCTTCGTGGCCATGGCTCAGAAGGGTAGCGGTGAACAACTTTTGAAGCTTGGAATCTTGGATGTCGAATATAAGAGAGTTCCGTGTGAGTATAAGACCAAGAACTTGGCGGTGCGGGTGGAAGAATCAAGCAAAAAACCATATTACTTGGCAATTAAATTTTTGTACGAAGGAGGTCAAACAGAGATAGTAGGCGTGGATGTTGCAGAGGTAGGATCATCAAAGTGGAGCTTCATGAGCAGAAACCATGGAGCAGTGTGGGACACAAGCATGGTTCCAGGAGGGGCATTGCAGATGAGGATAGTGGTGACATCAGGGTACGATGGGAAATGGATGTGGGCAAAGAAGGTGTTACCTGCTGACTGGAGAACTGGGCAAGTGTATGACACTGCTCTTCAGATCACTGACATTGCGCAAGAGGGCTGTTCTCCCTGTGACGATGCCCCCTGAAGAGCTCAGCTGGCTATGGCCGCCGGAGCTACCACCCCAAGATGGGTCACCCACGCTAAATCGGGAAAATGCAGCTTCATGGTTTTTGCAGCCTCCAAGTCTAACAGGCATCAAAGGCCTAAATTTACGGCATGCTCTCTTTCCCTCAACGGTTGCAGACCTCAAGGAGCAATTCAGCATCCAAATATCCCAGTTGGCACCATTGAAACACGCACTCTTGCCTCAGTTGCATCGCCTGCGATGGCCATGGACGCCCTCAACTCCGCCGTCTCCCACCTCATTTCCCAACCTCCTCTTTCTACCTCCGGCATCATCCGCCTCCAGGTGGCGATCCAAGAGCGGATTGAGGCTATTGATTGGCTCCATTCCCAATCCGAACTTTTGCTGCCTCGCTGCTTTTTCTCAGGTCGAGCGACGCTTCCCTCTCTGGGAAATGGTCATAGTTCAATGTCTATGGCATACGAGCACAAATTGGTCAGCGTCGCCGGTGTCGGTTCCGCCATCTTCTTCCGGCAGCCACATCCTTTTTCTTACGACGACTGGCTTTCCATCAAAAGGTTTCTTTCTGAGAGATGCCCGTTAATCCGAGCTTATGGAGCTATACGTTTCAATCCCAAAGCTAAGGTGTCGACCGAGTGGCTACCTTTTGGTTCTTTTTACTTCATGATTCCTCAGGTCGAGTTTGATGAGCTTGAAGAAACGTCGATGATTGCTACCACTATTGCGTGGGATACTGCTCTTTCCTGGTCATGGGAAAACGCAATCAATGCACTCCGAGCAACACTTTGCAAGGTTTCTTCTTTCATTGTGAAGTTTCCAAAACAAGCTCCTCGAACATCCATAATCATCAGTGATAACATTCCTTCTAAGGTAGAATGGGATCTTGCTGTTAACAGAGCTTTGCAGATGATACAGAAAAACCACTCCTTACTAAGCAAGGTTGTGCTAGCTCGAAGTACCAGAGTAGTGCCTATTGCTGACATTGATCCTCTTTCGTGGTTAGCATCCTTACAGGTTGAGGGTGCAGATGCTTACCAGTTTTTCCTACAACCGCCAAATGCACCGGCCTTCATTGGAAACACACCAGAGCAACTATTTCACAGAAAATGGCTTCACATAACTAGTGAAGCCTTGGCTGGAACCCGTGCACGAGGTGCAACAACAGCACTAGATCGTCAAATAGCACTAGATTTACTTTCCAGTCCAAAGGAGGATATGGAGTTCACTATAGTCAGAGAGACCATAAGAAGTAAATTGGAGGCGGTATGTGAGAATGTACTGGTGAAACCAAGCAAGGCAGTTAGAAAACTCCCAAGGATCCAACATTTATTTGCTCAATTAGCCGGCAGGTTAAGAAGTGAAGAAGATGAGTTTGAAATTTTGTCATCACTTCATCCAAGTCCCGCAGTTTGTGGGTTTCCAACAGAAGAGGCTCAAATTTTAATTGCAGATACAGAAGTATTTGATCGAGGCATGTATGCTGGACCTGTTGGTTGGCTTGGAGGTGGGGAGAGTGAGTTTGCTGTTGGCATCAGGTCAGCTTTGGTGGAAAAGGATATGGGAGCATGGATATATGCTGGAACAGGTATAGTGGAAGGAAGCAATCCTCACTTAGAGTGGGATGAGCTAGAACTCAAGACATCTCAGTTCACCAAGTTGCTCAAACTCGACTTGCCTCAAAGACAAAAGGTTGATGTATATGAGCATTGA 2577 0.473 MPTLMPSELPIQLDYAIYIPRPPLCFPHHKNMAFFLCCIFLLVSFATACDRCVHQTKAAYFSDDAAISSGACGYGSLALELSGGHLAAGVPSLYKNGAGCGACFQIRCKSSSLCSKSGSRVVLTDLNTHNETDFVLSRSAFVAMAQKGSGEQLLKLGILDVEYKRVPCEYKTKNLAVRVEESSKKPYYLAIKFLYEGGQTEIVGVDVAEVGSSKWSFMSRNHGAVWDTSMVPGGALQMRIVVTSGYDGKWMWAKKVLPADWRTGQVYDTALQITDIAQEGCSPCDDAPXRAQLAMAAGATTPRWVTHAKSGKCSFMVFAASKSNRHQRPKFTACSLSLNGCRPQGAIQHPNIPVGTIETRTLASVASPAMAMDALNSAVSHLISQPPLSTSGIIRLQVAIQERIEAIDWLHSQSELLLPRCFFSGRATLPSLGNGHSSMSMAYEHKLVSVAGVGSAIFFRQPHPFSYDDWLSIKRFLSERCPLIRAYGAIRFNPKAKVSTEWLPFGSFYFMIPQVEFDELEETSMIATTIAWDTALSWSWENAINALRATLCKVSSFIVKFPKQAPRTSIIISDNIPSKVEWDLAVNRALQMIQKNHSLLSKVVLARSTRVVPIADIDPLSWLASLQVEGADAYQFFLQPPNAPAFIGNTPEQLFHRKWLHITSEALAGTRARGATTALDRQIALDLLSSPKEDMEFTIVRETIRSKLEAVCENVLVKPSKAVRKLPRIQHLFAQLAGRLRSEEDEFEILSSLHPSPAVCGFPTEEAQILIADTEVFDRGMYAGPVGWLGGGESEFAVGIRSALVEKDMGAWIYAGTGIVEGSNPHLEWDELELKTSQFTKLLKLDLPQRQKVDVYEH 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0020 858 Pfam Expansin C-terminal domain 176 258 IPR007117 -
Lele36g0020 858 SUPERFAMILY ADC synthase 438 846 IPR005801 GO:0009058
Lele36g0020 858 FunFam isochorismate synthase, chloroplastic-like isoform X1 371 845 - -
Lele36g0020 858 Pfam Lytic transglycolase 87 163 IPR009009 -
Lele36g0020 858 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 69 173 IPR007112 -
Lele36g0020 858 PANTHER - 330 851 IPR044250 GO:0008909
Lele36g0020 858 Gene3D - 170 274 IPR036749 -
Lele36g0020 858 Gene3D Anthranilate synthase 370 845 IPR005801 GO:0009058
Lele36g0020 858 Gene3D - 44 169 IPR036908 -
Lele36g0020 858 SUPERFAMILY Barwin-like endoglucanases 37 171 IPR036908 -
Lele36g0020 858 Pfam chorismate binding enzyme 581 835 IPR015890 -
Lele36g0020 858 SUPERFAMILY PHL pollen allergen 173 268 IPR036749 -
Lele36g0020 858 TIGRFAM isochor_syn: isochorismate synthase 485 842 IPR004561 GO:0008909|GO:0009058
Lele36g0020 858 PRINTS Expansin/Lol pI family signature 90 108 IPR007118 GO:0005576
Lele36g0020 858 PRINTS Expansin/Lol pI family signature 215 229 IPR007118 GO:0005576
Lele36g0020 858 PRINTS Expansin/Lol pI family signature 255 269 IPR007118 GO:0005576
Lele36g0020 858 PRINTS Expansin/Lol pI family signature 68 86 IPR007118 GO:0005576
Lele36g0020 858 PRINTS Expansin/Lol pI family signature 156 172 IPR007118 GO:0005576
Lele36g0020 858 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 187 269 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0020 Lele-ChrLele36 139112 147550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0020 30 284 Expansin Gene Family AT3G45960 60.311 8.41e-101 312