Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0018 ATGCAAAGCCGCGTGGGTCCTACCACTCGTCGCCATCATATCAGTCTTCAATCAAACCCGGTCAGTCAGTCACGAACAAGGGCCTCGGGGACTGGCAAGAGCAGCCAGCGAGAGAATGTGACAGAGGATATGGAACTGCCAGGCTTCCGATTCCACCCCACCGAAGAAGAACTCCTCGATTTCTACCTCAAGAACACCCTCCTCGGCAACAAGCTCCGTTTCGACGTCATCGGCTTCCTCAACATTTATCACCACGATCCCTGGGACTTGCCTGGCCTCGCCAAGGTGGGAGAAAGAGAATGGTACTTCTTGGTGCCCAGGGACAGGAAGCACGGCAGCGGCGGCAGGCCCAACCGCACCACCCTGAAGGGCTTCTGGAAAGCCACCGGTTCCGACCGCAAAATCATCAGCCTCTCCGACCCCAAGCGCCTCGTCGGCCTCCGGAAGACCCTCGTCTTCTACCGGGGCAGGGCCCCCCGCGGCTCCAAGACCGACTGGGTCATGAATGAGTACCGCCTCCCCGACTCCTCCAAGTTGTCGAAGGACATTGTGCTCTGCAAGATATACCGAAAGGCCACCTCCTTGAAGGTGTTGGAGCAGAGGGCCGCCATGGAGGAGGAGATGAAGCAGCTCCCTAACCCTAACACCTCGCCTTGCAGCTCCATCGACAAGCAGGAGCTTTTCCAGCCCGAAACACCCGACGATGAATCATTTGACGAAGACCACAAACCCGCCTTACTCCGAACCAATCTCAAAGTTCCTGACCTCCAGCTTCCCCTCTCTTCCAATATGGACTGGAACCAAGACCCCTTCTGGTCTCAGATGAACTCTCCCTGGCTTTCCTCTCTCTCCCCCTCCCTCTTAAACTTCTAA 873 0.5704 MQSRVGPTTRRHHISLQSNPVSQSRTRASGTGKSSQRENVTEDMELPGFRFHPTEEELLDFYLKNTLLGNKLRFDVIGFLNIYHHDPWDLPGLAKVGEREWYFLVPRDRKHGSGGRPNRTTLKGFWKATGSDRKIISLSDPKRLVGLRKTLVFYRGRAPRGSKTDWVMNEYRLPDSSKLSKDIVLCKIYRKATSLKVLEQRAAMEEEMKQLPNPNTSPCSSIDKQELFQPETPDDESFDEDHKPALLRTNLKVPDLQLPLSSNMDWNQDPFWSQMNSPWLSSLSPSLLNF 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0018 290 Pfam No apical meristem (NAM) protein 47 173 IPR003441 GO:0003677|GO:0006355
Lele36g0018 290 FunFam NAC domain-containing protein 67-like 54 195 - -
Lele36g0018 290 Gene3D NAC domain 54 195 IPR036093 GO:0003677|GO:0006355
Lele36g0018 290 SUPERFAMILY NAC domain 46 191 IPR036093 GO:0003677|GO:0006355
Lele36g0018 290 MobiDBLite consensus disorder prediction 1 37 - -
Lele36g0018 290 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 44 234 - -
Lele36g0018 290 MobiDBLite consensus disorder prediction 1 43 - -
Lele36g0018 290 ProSiteProfiles NAC domain profile. 45 191 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0018 Lele-ChrLele36 133587 134668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0018 42 285 NAC Transcription Factor Family AT2G17040 56.410 1.26e-102 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele36g0018 NAM 9.7e-33 No_clan