Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1442 ATGGAAGCCAGTGATGGAAATAGTGAGCAGATTGTTGATGTTCGGTCGGTGGTTGAAGCTGTTTCTGCAGAAGAAGGAGATGTCCCTGTGTACCAGGTTGAAAGCTTGTGCATGCGCTGCGGTGAAAACGGGATGACAAGATTTTTACTGACTTTAATTCCGCACTTCAGGAAGATTTTGTTGTCAGCTTTTGATTGTCCTCATTGTGGTGAGAGGAACAATGAAGTACAGTTTGCTGGAGAAATCCAACCACGTGGTGGCTGCTACAGTTTGGAGATCCCATCAGGCAATCCGAAGATGCTCGATCGAAAAGTGGTAAAATCAGAATCTGCTACTATTAAGATACCAGAGTTGGATTTTGAGATTCCTCCTGAGGCTCAACGTGGATCTCTGTCAACGGTGGAAGGTATACTAGCACGAGCTGCTGATGAACTTCAGGCCCTTCAAGATGAGCGCAAAAAAATTGACCCACAGACGGCTGAAGCAATTGACCAGTTCTTAATGAAATTGAGAGCTTGCAAGGTATGCGCCATCATCTGA 540 0.4537 MEASDGNSEQIVDVRSVVEAVSAEEGDVPVYQVESLCMRCGENGMTRFLLTLIPHFRKILLSAFDCPHCGERNNEVQFAGEIQPRGGCYSLEIPSGNPKMLDRKVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILARAADELQALQDERKKIDPQTAEAIDQFLMKLRACKVCAII 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1442 179 Coils Coil 131 151 - -
Lele35g1442 179 Pfam ZPR1 zinc-finger domain 35 173 IPR004457 GO:0008270
Lele35g1442 179 FunFam Zinc finger protein ZPR1 25 80 - -
Lele35g1442 179 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 37 172 IPR004457 GO:0008270
Lele35g1442 179 Gene3D ZPR1, A/B domain 81 177 IPR042451 -
Lele35g1442 179 Gene3D ZPR1, zinc finger domain 26 80 IPR042452 -
Lele35g1442 179 SMART zpr1 35 177 IPR004457 GO:0008270
Lele35g1442 179 PANTHER ZINC FINGER PROTEIN ZPR1 12 174 IPR040141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1442 Lele-ChrLele35 20165196 20168782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1442 5 173 C2H2 Transcription Factor Family AT5G22480 79.412 1.84e-94 281