Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1436 ATGGAAGGAAGGGGATATGGTTATGGTGGCCCCGGCGGCTACAGGGGAGCGTCAAGAGGCCGAAATGGTGGCAGATCAGGAGGAGGACCACCGCGAGGCGGTGGTGGAAGAGGATTCCGTCACCAACCGCAGCCTCAGAATGATCGTTATGGGGGTGAGGACACAACGAGAGGCGGTTATGGTAGGGGAGGATTTGCTAGAGGGAGAGGCAGAGGAGGAGGAAGAGGTAGAGGAAATGGCGGAGATGGTGCTGGACCTTCAGTTTGGGTGGCCAATGAATCGGTTCAATCTCGCAATTCTGCTTCTGATCCAGTTCCGGAATTGGAACGACTTCAAATTTCACAACCGGCTCCAAACTCTTCTCCTACCCAGGAGACGAAAGATAAGGTTTCACCGGTTCATAGGCCTGACAAGGGTGGTACATTAGCAATTCGAACCAGCAAGCTTCGTGTCAATCACTTTCCTCTCATGTTCAGGCCTGATACTGTTTTGATGCATTATAATGTTGATGTGAAGCCCATTTCACCTGCCAAACCCGGTCGACCTCAAAGACTATCAAAATCTGTCCTCTCTATGATTAGGGAGACATTGTTTTCCGGTGACAACAGGTTGCCATTGGAGAAGACAGTGTATGATGGGGAAAAGAATATCCTCAGCGCGGTTCCTTTACCAGAAGAAACCTTCACGGTTACTATCTCAGCAGGAGAGGAGGATAGAAACTATTCATATAAGGTCACCTTAACGCTCGTTAATACGCTTGAGTATCGCAAGTTGAACCAATACCTTAACAAGGAGCTTATGTCAGTTCCCAGAGACGTTTTGCAAGGGATGGATATAGTGCTCAAGGAAAATCCAGCCAAGAGAACAATCCCTCTGGGACGTAGCTTCTATCCTTCAAATCCTCCCTTGTTACATAAGGATCTTCGCAATGGCATAATCGCAATAGGAGGATTTCAACACAGTTTGAAGACTACATCTCAGGGTTTGTCCTTGTGCCTGGACTACTCTGTTATATCTTTTCGAAAGCAATTGCCAGTCTTGGATTATCTATGTCAGCGTATTAATGGCTTTAGATTGGAAGAATTCGGGCGTTTCTGGAATCGCGTGAAGACGGAATTGGTTGGGTTAAAGGTAAATGTGACACACCGTAGAACCAGACAGAAGTTCACCATTCTAGGGCTATCTAAAGATGAGACAAGGAACATCACCTTTACCCTTAGGGATCCAGAGGGCAGGAATGTGCCGCAGCAAGTCACAATTCTTGACTATTTCTTGGATAAATACAACAAGGATATTGCCAACAAAGATATTCCGTGTTTAGATTTTGGGAGAAATGTCTTGGTGCCGATGGAGTTTTGCATCTTAGTTGATGGTCAGAGATATCCCAAAGAGAATTTGGATAAAATTGCTTCCAATATGTTGAAAAATATGTCATTGGCCCTTCCAAAGGACAGACAGAATGCCATACAAATGATGGTGGAGTCAGGTGATGGACCTTGCGGTGGTGGTATTATTCAAAATTTTGGAATGGAAGTGAACACAACCATGACTACCGTTTTAGGACGCATCATTGAGCCACCAAGATTGAAAGTAGGTGGTCGAAATGGCCAGATTATGACTGTAAGGGTGGATCCGGAGAAATGTCAATGGAATCTAGTTGGGAAATCTGTGATGAAAGGCAAGCCAGTTGAGCATTGGGGCATTATTGATTTTACAAGCAGAGAGTCAGATTCCCGGTTCAGATTAAGAACTAACGAATTCATTACTAAGCTCAAGGAAAAATTTATAAGCTTGGGTATTGGCATGAACGATCCTCTTTGGGTTGAACAATCTTGGATGAATCAACTTGCTAGTTATGGTTCTCTATCTGCATTACTTAAGAAAGTGAGTGATTGGGGTCAAGTGCAATTTATTCTGTGTGTGATGTCTCAGAAACATTTTGGGTATAAGTTGCTCAAGTGGATTTCAGAGACCAAGGTTGGTGTTGTGACGCAATGTTGTTTAGCTAGTACTGTGAATGCAGGGAAAGATCAGAATCTTACAAATCTTGCTCTCAAGATCAATGCCAAACTTGGAGGTAGTAATGCGGAGCTTGAGAACAGGCTCCCTTGCTTTGCAGGTGATGGGCATGTTATGTTTATAGGGGCAGATGTCAATCATCCTGCTGCTCGTGACGATAATAGTTTGTCGATTGCTGCTGTGGTTGGAACTCTCAATTGGCCTGCTGCAAATCGTTATGCGGCACGTATTAGCCCTCAATCCCGTCGGAAAGAACAGATATTGGACTTTGGAACAATTTGCCTTGAGCTTGTTAACTGTTACAGAAAGGTGAACCAAGTGAGACCAACAAAAATTGTTATTTTCCGCGATGGGGTGAGCGAGGGCCAATTTGACATGGTTCTTAATGAAGAGCTACGAGATCTGAGAAGTGTTTTCCAAAACGAGAAGTATTTTCCAACCATAACTTTGATTGTAGCACAGAAGCGACATCAGACTCGATTGTTTCGAGAGGAGCCTTCTGTTGGAAATGTGGCTCCTGGAACAGTGGTGGACACTGAAGTGGTACACCCTTTTGAGTTTGACTTCTACCTTTGCAGTCACTATGGAAGTTTAGGGACAAGCAAGCCCACCCACTATCACGTTTTGTGGGATGAGCACGAGTTTACCTCTAATGACTTACAGAAACTGATATATGATATGTGCTTTACCTTTGCAAGGTGCACTAAACCTGTATCTTTGGTCCCTCCGGTGTACTATGCCGACCTTGTTGCTTATCGAGGACGGCTATACTATGATGCAAAGGCCGAGTTGGAGAGCTCGAAGCCGGCATCGTTTCCTTCTTCATCCGCAAGTGAACACAGGTATTTCAAGCTGCACGAGCACTTGCAAGACATGATGTTCTTTGTCTAA 2910 0.4471 MEGRGYGYGGPGGYRGASRGRNGGRSGGGPPRGGGGRGFRHQPQPQNDRYGGEDTTRGGYGRGGFARGRGRGGGRGRGNGGDGAGPSVWVANESVQSRNSASDPVPELERLQISQPAPNSSPTQETKDKVSPVHRPDKGGTLAIRTSKLRVNHFPLMFRPDTVLMHYNVDVKPISPAKPGRPQRLSKSVLSMIRETLFSGDNRLPLEKTVYDGEKNILSAVPLPEETFTVTISAGEEDRNYSYKVTLTLVNTLEYRKLNQYLNKELMSVPRDVLQGMDIVLKENPAKRTIPLGRSFYPSNPPLLHKDLRNGIIAIGGFQHSLKTTSQGLSLCLDYSVISFRKQLPVLDYLCQRINGFRLEEFGRFWNRVKTELVGLKVNVTHRRTRQKFTILGLSKDETRNITFTLRDPEGRNVPQQVTILDYFLDKYNKDIANKDIPCLDFGRNVLVPMEFCILVDGQRYPKENLDKIASNMLKNMSLALPKDRQNAIQMMVESGDGPCGGGIIQNFGMEVNTTMTTVLGRIIEPPRLKVGGRNGQIMTVRVDPEKCQWNLVGKSVMKGKPVEHWGIIDFTSRESDSRFRLRTNEFITKLKEKFISLGIGMNDPLWVEQSWMNQLASYGSLSALLKKVSDWGQVQFILCVMSQKHFGYKLLKWISETKVGVVTQCCLASTVNAGKDQNLTNLALKINAKLGGSNAELENRLPCFAGDGHVMFIGADVNHPAARDDNSLSIAAVVGTLNWPAANRYAARISPQSRRKEQILDFGTICLELVNCYRKVNQVRPTKIVIFRDGVSEGQFDMVLNEELRDLRSVFQNEKYFPTITLIVAQKRHQTRLFREEPSVGNVAPGTVVDTEVVHPFEFDFYLCSHYGSLGTSKPTHYHVLWDEHEFTSNDLQKLIYDMCFTFARCTKPVSLVPPVYYADLVAYRGRLYYDAKAELESSKPASFPSSSASEHRYFKLHEHLQDMMFFV 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1436 969 SMART Piwi_a_2 637 932 IPR003165 GO:0003676
Lele35g1436 969 CDD Piwi_ago-like 504 931 IPR045246 -
Lele35g1436 969 Pfam Argonaute linker 1 domain 292 342 IPR014811 -
Lele35g1436 969 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 146 934 - -
Lele35g1436 969 Pfam N-terminal domain of argonaute 147 281 IPR032474 -
Lele35g1436 969 MobiDBLite consensus disorder prediction 113 127 - -
Lele35g1436 969 SMART PAZ_2_a_3 344 479 IPR003100 GO:0005515
Lele35g1436 969 ProSiteProfiles PAZ domain profile. 368 457 IPR003100 GO:0005515
Lele35g1436 969 CDD PAZ_argonaute_like 345 456 - -
Lele35g1436 969 SUPERFAMILY Ribonuclease H-like 633 932 IPR012337 -
Lele35g1436 969 SUPERFAMILY PAZ domain 340 493 IPR036085 GO:0005515
Lele35g1436 969 Gene3D paz domain 338 461 - -
Lele35g1436 969 ProSiteProfiles Piwi domain profile. 637 932 IPR003165 GO:0003676
Lele35g1436 969 MobiDBLite consensus disorder prediction 1 88 - -
Lele35g1436 969 MobiDBLite consensus disorder prediction 113 143 - -
Lele35g1436 969 Gene3D - 705 969 IPR036397 GO:0003676
Lele35g1436 969 Gene3D - 523 700 - -
Lele35g1436 969 SMART DUF1785_2 290 343 IPR014811 -
Lele35g1436 969 Pfam PAZ domain 365 471 IPR003100 GO:0005515
Lele35g1436 969 Pfam Piwi domain 638 929 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1436 Lele-ChrLele35 20121328 20125085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1436 107 951 Eukaryotic Initiation Factors Gene Family AT1G48410 34.403 8.17e-145 456