Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1430 ATGAAAGAGGGAGGAAGAAAGCAGGGTGCAGCGTCACCGTGTGCGGCATGCAAGCTTCTCCGAAGAAGATGTGCTAACGACTGTGTCTTCGCTCCTTATTTCCCCGCCGATGAGCCCCACAAGTTCGCTAATGTTCACAAAGTCTTTGGAGCCAGTAATGTCAACAAGATGCTTCAGGAGCTACCAGTGCATCAAAGAGGGGATGCGGTGAGCAGCATGGTGTACGAGGCAAATGCAAGAGTGAGAGATCCTGTGTATGGCTGTGTTGGGGCCATCTCTTCTCTTCAGCAACAGATTGATCTGCTTCAGACCCAATTGGCCTTAGCCCAGGCTGAGGTGGTTCACCTTAGGGTTAGCCAGTCTGCTTCCCTTTCCAACCATGGGCTAAGCCCAACTAGTAGCGACTCGCCGCCACATTCGAAGCCCATTTTCGACGTGGACTTTGTGATGGACCAGTCCACTTATTCTGATTCAATGTGGCCCTGCTAG 489 0.5194 MKEGGRKQGAASPCAACKLLRRRCANDCVFAPYFPADEPHKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLALAQAEVVHLRVSQSASLSNHGLSPTSSDSPPHSKPIFDVDFVMDQSTYSDSMWPC 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1430 162 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Lele35g1430 162 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Lele35g1430 162 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 126 - -
Lele35g1430 162 Coils Coil 92 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1430 Lele-ChrLele35 20077194 20078735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1430 1 162 AS2 family AT1G31320 72.674 2.19e-79 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele35g1430 LOB 9.7e-44 No_clan