Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1409 ATGAAGCTCTTTAGGCTTTTGATTTTATCCTTATCTTTCTTCTCTGTCATGGGACAGCTTCCTTCTCAGGACATCTTAGCATTGTTGGAATTTAAGAAAGGCATCAAGCATGACCCTACTCGTTATGTCCTCAATTCCTGGAATGAAGAATCCATTGACTTTAATGGATGCCCATCTTCATGGAATGGAGTTCTGTGTAATGGTGGTAATGTTGCCGGGGTTGTCCTAGATAACCTGGGAGTCTCTGCTGAGGTTGACTTGAGTGTTTTTTCAAACCTCACAAAGCTTGTCAGGCTCTCCTTGTCCAACAATTCCATATCAGGAACACTCCCCGACAATGTTGGAGACTTCAAGAGTCTTCAATTTCTAGACGTCTCCAATAACCTTTTCTCTTCGTCCATACCACAGGGAATTGGTAAGCTAGCTAGCTTACAGAACTTGTCATTGGCGGGGAATAATTTCTCTGGCCCAATTCCTGTCTCAATTGCAGGGATGTCATCGATCCAATCTTTGGACTTGAGCCGTAACTCCTTTTCTGGGGTGCTGCCGGCTTCTTTGACTAAGCTGAATAGCCTGGCATCTCTCAATTTGTCTCATAACAGCTTCACTGGAAAGATTCCCAAAGGTTTTGATCTGATGTCTGCTCTTGAAAAGGTTGACTTGCATGGAAATATGCTTGATGGTCAACTAGATATTAAATTTATTCTTTTTACAAGTGCTAGCTATGTTGATTTTAGTGATAATATGTTAGTGAGTTCTAACTCCCCACAGCAGAGGTTTCTACCCCGAATCTCTGAAAGTATCAAGTATTTGAATTTAAGCCACAACCAGCTGATTGGATTGTTGGATGGTGAAGGCGAGCTGTCACTTTTTGAAGACCTGAAGGTGTTGGATCTTAGCTACAATCAATTGTCTGGAGAACTGCCTGAATTAGAATTTGTCTATGATCTCCAGGTCCTCAGGCTTAGCAACAACAGATTTTCAGGATTTCTTCCAAATAGCCTGCTCAAGGGAGACCCTTTGGTTATAACTGAACTTGACTTGAGTGCCAACAATCTCTCAGGGCCAATAGGATTAATCACATCAACGACATTGCGCTTTCTGAATCTCTCATCAAATGGTTTCACTGGTGAGCTGCCACTTCTAACTGGGAGCTGTGCGGTTCTTGATCTTTCAAATAATAGACTAGAAGGAAATCTATCCAGGATGGTGAAATGGGGAAATATAGAATTTCTTGATCTCAGTAGGAATCATTTCACAGGGCCCATTCCTGAGGAAACTCCTCAATTTTTGCGATTGAATTACCTGAATTTCTCCCATAATTTTCTTAGCAGCTACCTCCCTAGTGTTTTAATGCAGTATCCGAAGCTAAGAGTGCTTGATCTTAGTTCCAACCAGTTAGATGGAGAGCTTCCTGATAAGCTGCTTGATATGCCAACTTTGCAAGAGCTTCATCTTGAAAATAATCTCATTTCAGGCGGCATTAATTTATCTTCTTCCCCTGGTCAATCTGATCTTCTGATTCTCGATATTTCTCACAACCAATTTAATGGGTACTTTCCTGAAAATTTCGGATCATTAACTGACCTGAAAGTGCTCAATATTGCTGGAAATAATTTTTCTGGTTCTTTTCCAAGTGCCATTGAATTGAGTTCATTAGATTCGTTAGATATATCAGATAATCATTTTACAGGTCCGTTACCAACTGACCTGCCAAAGGGACTAAAAAACTTTAATGCTTCATACAATGATCTGTCTGGTATTGTCCCAGAAAATCTCAGGAAGTTCCCTAGTTCTTCTTTCTTTCCTGGGAATGCTAAGTTGCGTTACCCGAATGGTCCTCCTGGATCAACCAATATGCCAGCTGAAGGTTCAAAGAAGAAGCCTATGAGCACTATCATTAAAGTAATAATTATAGTATCATGTGTGGTTGCACTATTCATAGTAATCCTGCTTGCAATCTTCATACATTACATATGCATATCAAGATCTCCACCAGAATATGCTGCTAGTAAGGAGTCAAACTTACCTGGCATAGGCCGTACAACAGACAGGGGTGGTGCTTTGGTTGTGTCAGCTGAGGATCTTGTGACCTCAAGGAAAGGATCATCTTCAGATATAATCAGCCCAGATGAAAAATTGGCAGCCACAACTATGTCCCCATCAAAAAACAGCCACTTTTCCTGGTCACCGGGGTCTGGTGATTCATTCACTGCTGAAAATTTTGCAAGGCTTGATGTGAGATCACCCGATAAGTTAATTGGCGAGCTGCATTTTCTTGATGATGCAATAACGTTGACCCCTGAGGAGCTTTCAAGGGCCCCTGCTGAAGTTTTGGGGAGAAGCAGTCATGGAACTTCTTATAAGGCTACTCTGGAGAATGGCTTGTTACTGAGGGTGAAGTGGTTGAGAGAAGGAGTGGCTAAACAGAGAAAAGAATTCGCTAAAGAGGCTAAAAAGTTTGCAAACATCAGGCATCCAAATGTTGTGGGATTGAGAGGATATTACTGGGGTCCTACACAGCATGAGAAGCTTATTCTTTCTGACTTCATTTCTCCTGGAAGTCTTGCAACTTTTCTTTACGATCGACCAGGAAGAAAAGGTCCACCATTAACCTGGGCCCAGAGGCTCAAGGTAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCACTTCGATCGTGCTGTTCCTCATGGGAACCTCAAAGCAACAAATGTGCTGTTAGATACACCCGATTTGAATGCAAGAGTCGCTGATTATTGCCTTCACCGGCTAATGACTCAGGCCGGGACTACCGAACAGATTCTTGACGCCAGGGTTTTGGGATATCGTGCGCCAGAGTTGGCTGCTTCCAAGAAGCCAACCCCCTCCTTTAAATCAGATGTCTATGCTTTCGGAGTGATACTCTTGGAACTTTTAACTGGAAGATGTGCCGGTGATGTGATATCAGGTGAGGATGGAGGTGTTGATATGACTGATTGGGTAAGGTTGCGTGTGGCAGAAGGCAGAGGATTGGACTGTTTCGATGCTGCGTTGATGCCAGAATTGGGAAATCCAAGTGCAGAAAAGGGAATGAAGGATTTCCTAGGAATAGCTCTACGATGCATTCGGTCTGTTTCTGAGAGGCCAGGTATCAAGACTATATATGAAGACCTTTCATCTATATAG 3168 0.4258 MKLFRLLILSLSFFSVMGQLPSQDILALLEFKKGIKHDPTRYVLNSWNEESIDFNGCPSSWNGVLCNGGNVAGVVLDNLGVSAEVDLSVFSNLTKLVRLSLSNNSISGTLPDNVGDFKSLQFLDVSNNLFSSSIPQGIGKLASLQNLSLAGNNFSGPIPVSIAGMSSIQSLDLSRNSFSGVLPASLTKLNSLASLNLSHNSFTGKIPKGFDLMSALEKVDLHGNMLDGQLDIKFILFTSASYVDFSDNMLVSSNSPQQRFLPRISESIKYLNLSHNQLIGLLDGEGELSLFEDLKVLDLSYNQLSGELPELEFVYDLQVLRLSNNRFSGFLPNSLLKGDPLVITELDLSANNLSGPIGLITSTTLRFLNLSSNGFTGELPLLTGSCAVLDLSNNRLEGNLSRMVKWGNIEFLDLSRNHFTGPIPEETPQFLRLNYLNFSHNFLSSYLPSVLMQYPKLRVLDLSSNQLDGELPDKLLDMPTLQELHLENNLISGGINLSSSPGQSDLLILDISHNQFNGYFPENFGSLTDLKVLNIAGNNFSGSFPSAIELSSLDSLDISDNHFTGPLPTDLPKGLKNFNASYNDLSGIVPENLRKFPSSSFFPGNAKLRYPNGPPGSTNMPAEGSKKKPMSTIIKVIIIVSCVVALFIVILLAIFIHYICISRSPPEYAASKESNLPGIGRTTDRGGALVVSAEDLVTSRKGSSSDIISPDEKLAATTMSPSKNSHFSWSPGSGDSFTAENFARLDVRSPDKLIGELHFLDDAITLTPEELSRAPAEVLGRSSHGTSYKATLENGLLLRVKWLREGVAKQRKEFAKEAKKFANIRHPNVVGLRGYYWGPTQHEKLILSDFISPGSLATFLYDRPGRKGPPLTWAQRLKVAVDVARGLNYLHFDRAVPHGNLKATNVLLDTPDLNARVADYCLHRLMTQAGTTEQILDARVLGYRAPELAASKKPTPSFKSDVYAFGVILLELLTGRCAGDVISGEDGGVDMTDWVRLRVAEGRGLDCFDAALMPELGNPSAEKGMKDFLGIALRCIRSVSERPGIKTIYEDLSSI 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1409 1055 FunFam LRR receptor-like serine/threonine-protein kinase GHR1 20 265 - -
Lele35g1409 1055 Gene3D Phosphorylase Kinase; domain 1 766 850 - -
Lele35g1409 1055 Gene3D Ribonuclease Inhibitor 235 619 IPR032675 -
Lele35g1409 1055 ProSiteProfiles Protein kinase domain profile. 773 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1409 1055 Gene3D Transferase(Phosphotransferase) domain 1 852 1055 - -
Lele35g1409 1055 Pfam Leucine Rich repeat 455 470 IPR001611 GO:0005515
Lele35g1409 1055 Pfam Leucine Rich repeat 362 378 IPR001611 GO:0005515
Lele35g1409 1055 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Lele35g1409 1055 SUPERFAMILY Protein kinase-like (PK-like) 776 1052 IPR011009 -
Lele35g1409 1055 SUPERFAMILY L domain-like 266 596 - -
Lele35g1409 1055 SUPERFAMILY L domain-like 44 377 - -
Lele35g1409 1055 Pfam Leucine Rich Repeat 317 336 IPR001611 GO:0005515
Lele35g1409 1055 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 382 613 - -
Lele35g1409 1055 FunFam Leucine-rich repeat receptor-like protein kinase 758 850 - -
Lele35g1409 1055 Gene3D Ribonuclease Inhibitor 23 142 IPR032675 -
Lele35g1409 1055 Gene3D Ribonuclease Inhibitor 143 213 IPR032675 -
Lele35g1409 1055 ProSiteProfiles Leucine-rich repeat profile. 293 315 IPR001611 GO:0005515
Lele35g1409 1055 PANTHER OS07G0626500 PROTEIN 7 1055 - -
Lele35g1409 1055 Pfam Protein tyrosine and serine/threonine kinase 777 974 IPR001245 GO:0004672|GO:0006468
Lele35g1409 1055 SMART LRR_typ_2 454 478 IPR003591 -
Lele35g1409 1055 SMART LRR_typ_2 165 188 IPR003591 -
Lele35g1409 1055 SMART LRR_typ_2 550 574 IPR003591 -
Lele35g1409 1055 SMART LRR_typ_2 117 141 IPR003591 -
Lele35g1409 1055 SMART LRR_typ_2 314 338 IPR003591 -
Lele35g1409 1055 SMART LRR_typ_2 189 212 IPR003591 -
Lele35g1409 1055 SMART LRR_typ_2 93 116 IPR003591 -
Lele35g1409 1055 SMART serkin_6 773 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1409 1055 Pfam Leucine rich repeat 167 226 IPR001611 GO:0005515
Lele35g1409 1055 Pfam Leucine rich repeat 508 563 IPR001611 GO:0005515
Lele35g1409 1055 FunFam Pollen receptor-like kinase 1 851 1055 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1409 Lele-ChrLele35 19918780 19922694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1409 24 1003 Receptor kinase-like Gene Family AT4G36180 27.828 1.58e-89 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele35g1409 PK_Tyr_Ser-Thr 2.7e-28 CL0016