Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1403 ATGGAAAAACAGAATAAAAAGTCAGAAGAATACTTCACTAGAGATGAAAAAGATGATGAGGATGAGGATAACAAGGAAAATGAGTATGGTGGCGATGAAGGAGAAGGTGAAGATGCTGAGGTTGGCAATGATCTTCAAGATGAGGCAGAGTACTTGTTAGGAGAGGAAGGTCCAACTTCTACAGCGGAGCAACTTGAAGGAGGTCTTCCCGCAGAAGATGCGGACGAGGATAATGAGCCTGCTAGACATTTCAGCCATGGATCTTACCTGGTTCAAGGAAAGCTAGACCATGGAATGGAGGATTATATTTTTGCTGAACACAGGAACATCAATGGCTACGACTTAGGACTATTGCAATCTTTGATGGCCACGCCGCCTGACTTGTGGAAAAATCCAGTACGTGTCCTGAAGAGATCATGCAAGGCTATAGATGAGGAGATCCTAGAAAAGGTAGCAGATTCACGAGGGGGATCGACGGCTGTTGTAGGAATACTTGTTAATGGAGTGAAGTTACTGGTGGCCAACGTTGGCGATTCTCGAGCAATATTATGCAGAAAAGGCGTGGCGAAACCAATAACAGTAGATCATGAGCCACAGAGAGAGAAAGATCTTGTTGAGAGCAAAGGAGGTTTTGTGTCTAAGGCACCTGGGTGTGTTCCGAGAGTGGACGGTGTATTAGCAATGAGCAGGGCAATTGGGGATGGGAGATTGAAGGAACACATCACTGCAGAACCAGATGTGATGGTTCAAAACATTGGTGACGACACTGAGTTCATCATTTTGGCTAGTGATGACCTCTGGAAGGTGATGACGAACGAAGAGGCTTGTGAGTGCGTGAAGGACATGGATGATGCCAGAAAAGCAGCTAAGAAGTTGGTTAAACAAGCATTAGCTCAAGGGAGCTACGATGATATTTCATGCATTGTTGCAATGTTTTAG 939 0.4505 MEKQNKKSEEYFTRDEKDDEDEDNKENEYGGDEGEGEDAEVGNDLQDEAEYLLGEEGPTSTAEQLEGGLPAEDADEDNEPARHFSHGSYLVQGKLDHGMEDYIFAEHRNINGYDLGLLQSLMATPPDLWKNPVRVLKRSCKAIDEEILEKVADSRGGSTAVVGILVNGVKLLVANVGDSRAILCRKGVAKPITVDHEPQREKDLVESKGGFVSKAPGCVPRVDGVLAMSRAIGDGRLKEHITAEPDVMVQNIGDDTEFIILASDDLWKVMTNEEACECVKDMDDARKAAKKLVKQALAQGSYDDISCIVAMF 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1403 312 CDD PP2Cc 84 309 IPR001932 -
Lele35g1403 312 PANTHER PROTEIN PHOSPHATASE 75 310 - -
Lele35g1403 312 MobiDBLite consensus disorder prediction 1 83 - -
Lele35g1403 312 SMART PP2C_4 78 310 IPR001932 -
Lele35g1403 312 Pfam Protein phosphatase 2C 131 305 IPR001932 -
Lele35g1403 312 SUPERFAMILY PP2C-like 81 312 IPR036457 -
Lele35g1403 312 MobiDBLite consensus disorder prediction 15 51 - -
Lele35g1403 312 Gene3D - 86 312 IPR036457 -
Lele35g1403 312 ProSiteProfiles PPM-type phosphatase domain profile. 85 312 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1403 Lele-ChrLele35 19893982 19895583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1403 60 312 PP2C-type Phosphatase Gene Family AT3G15260 45.290 2.60e-77 236