Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1377 ATGGCGCCGAGTATTAAAAATCTACAGCTAACTTCCCTCACAAACGCCGCCGCTTCCGATGACGGTGATGCCGAGGGCCTGGAGGAAGTGCGGCTTTTGGACTCCTACGAAGATAGAAACTACAATGGTTCCGATGGAATTGAAGAAGGGCTGAAGCGAATTCATGTCAGAGTCAATGGCATGACCTGCGCTGCTTGCTCCAATTCCGTCGAAGCAGCTCTGAATGCCGTCGATGGCGTCATCAGCGCCTCCGTGGCTTTGCTTCAGAACAAGGCTGAGGTGGTTTACAACCCGTCTCTTGTTAAGGTTGATCTGGGCTTTGCTTGA 327 0.5199 MAPSIKNLQLTSLTNAAASDDGDAEGLEEVRLLDSYEDRNYNGSDGIEEGLKRIHVRVNGMTCAACSNSVEAALNAVDGVISASVALLQNKAEVVYNPSLVKVDLGFA 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1377 108 ProSiteProfiles Heavy-metal-associated domain profile. 53 108 IPR006121 GO:0046872
Lele35g1377 108 SUPERFAMILY HMA, heavy metal-associated domain 49 103 IPR036163 GO:0046872
Lele35g1377 108 PRINTS Copper-transporting ATPase 1 signature 79 102 - -
Lele35g1377 108 PRINTS Copper-transporting ATPase 1 signature 53 78 - -
Lele35g1377 108 ProSitePatterns Heavy-metal-associated domain. 58 88 IPR017969 GO:0046872
Lele35g1377 108 FunFam Copper-exporting P-type ATPase A 50 105 - -
Lele35g1377 108 Pfam Heavy-metal-associated domain 56 101 IPR006121 GO:0046872
Lele35g1377 108 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 50 103 - -
Lele35g1377 108 CDD HMA 56 99 IPR006121 GO:0046872
Lele35g1377 108 Gene3D - 51 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1377 Lele-ChrLele35 19671739 19672065 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1377 58 104 Primary Pumps ATPases AT5G44790 48.936 2.23e-07 45.8