Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1368 ATGGCTGATTCTCCCTCTCCCTCTCCCTCTCCCTCCTCCATGACCACCGCCTCCGCCACTCTCCACCATCCCTCCGCCTTCGATCTCACTGTTCTCGTCGCCGCCATTGTCTGCGCTTTCCTCTGCGCCCTCGGCCTCAACACCATGCTCCACTGCGTCTTCCAATGCGCCGTCACTGAACCTCTGCAATGGATCGCCTCTCGCCGAATCAATTCTGGGCTCAAGAAGAAAGACATGGTCGCTCTTCCTACTTCCACTTATTCCGCCAACCCCATGTCTTCTTCCTCTTCTGCTTCTAATTGTGCGATTTGCTTGGCCGATTTCAGCGATGGAGAGCGAATTAGGTATCTCCCAAAGTGCAGTCATACATTCCACGTGGCTTGTATCGATAAGTGGTTGCTTTCTCATTCATCTTGCCCAACTTGCCGCCATTTTCTGAAATCCTCCACTGATTCACTTAACACTCTCCATCTTGTCATACCATAG 486 0.5226 MADSPSPSPSPSSMTTASATLHHPSAFDLTVLVAAIVCAFLCALGLNTMLHCVFQCAVTEPLQWIASRRINSGLKKKDMVALPTSTYSANPMSSSSSASNCAICLADFSDGERIRYLPKCSHTFHVACIDKWLLSHSSCPTCRHFLKSSTDSLNTLHLVIP 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1368 161 Pfam Ring finger domain 100 143 IPR001841 -
Lele35g1368 161 SUPERFAMILY RING/U-box 100 150 - -
Lele35g1368 161 FunFam E3 ubiquitin-protein ligase ATL6 63 149 - -
Lele35g1368 161 PANTHER RING-H2 FINGER PROTEIN ATL78 18 149 IPR044602 GO:0016567|GO:0016740
Lele35g1368 161 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Lele35g1368 161 SMART ring_2 101 142 IPR001841 -
Lele35g1368 161 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 148 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1368 Lele-ChrLele35 19609524 19610009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1368 1 146 C3H Transcription Factor Family AT2G17450 41.060 4.27e-34 116