Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1357 ATGAATTTCTCAATTGGAGGTGGTGGGAATGGGAATGGGAATAGGAATGGGAGTGGGAATGGTAAAGGCCCTAACAATCCTGGCAATAGAGGAAGAAAGATGCACCATCGCCACACTCCCTTTCAGATAACACAACTTGAAGCATTTTTCAAGGAGAACCCTCATCCCGATGAAAACCAACGACGCCAGTTAGGCAGGGAGCTGGGGCTTGATTCAAGACAAATCAAGTTTTGGTTTCAGAACAAGAGAACTCAAACAAAGACTCAACATGAGAGGGAAGATAATGCAATGCTTCGGGCTGAAAATGAAAGGATGCAATGTGAGAATATAGCCATCAAAGAGGCACTGAAGGACATGATTTGCCCCTCTTGTGGGGGTCCTCCCTTTGGGGAAGGGGAACTTGGCCGTACTGTCCATGAGCTGCACCAAGAGAATCTTCGACTGAAACAACAGTATGACAGAATATCGAACATACTCGCAATGTGCATTGGCAGACCAATATCAGAACCAGAATCCTCTGTGGATCCTTCCTCCTCGGCCGGATCTCCGCTGCCGGATCTGTCACCGGGAAATTCCCTGAATCTAGAGAGTATAGGTAGCCCCATTAATCTTGACATGGACTTAGGTTCAGCTATCACAGTTTCAGATGAGAACATGTTCCCGTCCTTAATGGGAGAAGTCACAGACGTGGAAAAGGATCTGATGATAGAGGCTGCTCATAACGCCATGGATGAATTGCTGAAGCTTATGCCTAATGATGAGCCCTTATGGGTGAAGACTTCTAATGGTGGCCAACGTGTTCTTCATCGTGAGACCTATGAAAGGATATCTCCTAGGGCTAATCACTACAGAAGTTCCTATGCTCGTAGAGAAGCATCGAAAGATTCACGAATGGTTTGGATGAATGCCATGCAATTGGCCCACATGTTCTTAGATCTGGAAAAGTGGCTCAATCTGTTCCCCACAATTGTTAGGAAAGCTGAAATACTTGAAGTGCTTGATGTAGGACAATCATCAAACCGTTCTGGAGCTTTGCAGCTGATGTGTGAAGAGATGCACATTCTGTCACCATTGGTGGCAGCTCGAGAATTCTGCTTCATTCGATACTGTCAACAAATTGACGTAGGTGTGTGGATAATAGCTGACGTGTCATTCGATTCCTTAAGAGACAACATCCCTATCTCTCGTACTTGGAAGTTCCCTTCTGGTTGCATCATTCATCAGATGCCCAATGGCTTCTCCAAGGTTACTTGGATTGAGCATGTGGAGGTGGACGACAAGAGCCATACACACAGGCTGTTCAGAGATCTTGTTGCGGGTAATCTTGCTTATGGAGCTGAAAGATGGGTCGTTACACTTCAAAGAATGTGCGAACGATTTGTGTTTGCGTACGATGAAAGTATCCCAACCGAACAAGCTCGAAAAGTGACGAGTTATGGAGGTGCAAGGAGGAGGTTCATGGAGCTTACTAATCGAATGGTGAAGGACTTCTGTCAAGCTCTGGACATGTCAAGGAAGGAGTCCCCTGATTTATGCGAAGCGAATAACAGTGGGATTAGGGTTTCTGTTAGGAGCAACAGAGAAAGAGGTCAGCCTGAAGGCATGGTTATTACTGCTTCAACCTCTCTCTGGCTTCCAGTTTCCCATAAAACTGTTTTTGAATTCCTCAACGATGACACAAGACGAGCTAAGTGGGATGTGCTTTCCAATGGAAACACAGGGATTCATCAAATCGGATACATCTCCAGTGGAACCCATTCTGCCAACTGTATCAAAATTATGCAGCCTACCATGCCAGATGAGAGCGGTGTGCTGATTCTTCAAGAAACTTGCACTGATAGCTTGGGATCTATGCTTGTGTATGCTCCCATTGACATGCCGCTGATAAATATGTGTGGGAGGGGAACAATCGACCTTTCGCTGGTGGCGATCCTTCCGTCGGGCTTCGTGATCTCGGGCGACGGTCACCGGCGTCATCCCCGCCCGTTTTTTGCCGGAGAATCTAGCAGCTCATCGAGCTCGACTGAAGGCGGTTCATCATCCTCATCAGGAGGAAGTCTTCTGACAGTGACTTTCCAGATTCTGGTTTGCAGAAATGACGAAGTGAGGCAACTGAACGTGGAAACTGTGGCAACAATCAACTCGCTCCTCAACTCAACTGTCGAGAAGATTAAGGATGCTTTCAACTGTGGAGGCCTCGATTAA 2205 0.4667 MNFSIGGGGNGNGNRNGSGNGKGPNNPGNRGRKMHHRHTPFQITQLEAFFKENPHPDENQRRQLGRELGLDSRQIKFWFQNKRTQTKTQHEREDNAMLRAENERMQCENIAIKEALKDMICPSCGGPPFGEGELGRTVHELHQENLRLKQQYDRISNILAMCIGRPISEPESSVDPSSSAGSPLPDLSPGNSLNLESIGSPINLDMDLGSAITVSDENMFPSLMGEVTDVEKDLMIEAAHNAMDELLKLMPNDEPLWVKTSNGGQRVLHRETYERISPRANHYRSSYARREASKDSRMVWMNAMQLAHMFLDLEKWLNLFPTIVRKAEILEVLDVGQSSNRSGALQLMCEEMHILSPLVAAREFCFIRYCQQIDVGVWIIADVSFDSLRDNIPISRTWKFPSGCIIHQMPNGFSKVTWIEHVEVDDKSHTHRLFRDLVAGNLAYGAERWVVTLQRMCERFVFAYDESIPTEQARKVTSYGGARRRFMELTNRMVKDFCQALDMSRKESPDLCEANNSGIRVSVRSNRERGQPEGMVITASTSLWLPVSHKTVFEFLNDDTRRAKWDVLSNGNTGIHQIGYISSGTHSANCIKIMQPTMPDESGVLILQETCTDSLGSMLVYAPIDMPLINMCGRGTIDLSLVAILPSGFVISGDGHRRHPRPFFAGESSSSSSSTEGGSSSSSGGSLLTVTFQILVCRNDEVRQLNVETVATINSLLNSTVEKIKDAFNCGGLD 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1357 734 MobiDBLite consensus disorder prediction 169 193 - -
Lele35g1357 734 Gene3D - 236 434 IPR023393 -
Lele35g1357 734 MobiDBLite consensus disorder prediction 665 684 - -
Lele35g1357 734 FunFam Homeobox-leucine zipper protein HDG1 18 105 - -
Lele35g1357 734 Gene3D - 20 106 - -
Lele35g1357 734 MobiDBLite consensus disorder prediction 1 25 - -
Lele35g1357 734 Pfam Homeodomain 32 87 IPR001356 GO:0003677
Lele35g1357 734 ProSiteProfiles START domain profile. 228 462 IPR002913 GO:0008289
Lele35g1357 734 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 32 729 IPR042160 -
Lele35g1357 734 CDD START_ArGLABRA2_like 232 458 - -
Lele35g1357 734 MobiDBLite consensus disorder prediction 661 684 - -
Lele35g1357 734 CDD homeodomain 32 90 IPR001356 GO:0003677
Lele35g1357 734 Pfam START domain 239 459 IPR002913 GO:0008289
Lele35g1357 734 SMART HOX_1 31 93 IPR001356 GO:0003677
Lele35g1357 734 SUPERFAMILY Bet v1-like 483 655 - -
Lele35g1357 734 MobiDBLite consensus disorder prediction 171 193 - -
Lele35g1357 734 SUPERFAMILY Homeodomain-like 24 92 IPR009057 -
Lele35g1357 734 SMART START_1 237 459 IPR002913 GO:0008289
Lele35g1357 734 MobiDBLite consensus disorder prediction 1 36 - -
Lele35g1357 734 SUPERFAMILY Bet v1-like 229 459 - -
Lele35g1357 734 ProSiteProfiles 'Homeobox' domain profile. 29 89 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1357 Lele-ChrLele35 19524007 19530451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1357 29 729 Homeobox Transcription Factor Family AT1G73360 43.889 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele35g1357 START 2.3e-35 CL0209