Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1350 ATGTTAGACGTTCCCGGTTCAGGTCGTGATTCCGAGCTTAGTTTAGAGGCTCTAAGTTCAACCCAGCGTAGTTCCATGAGCAGCGAAAGTATTTGCAGCACCAGTTTCAGCCGTCTCTCCTTCGAGCTCCTCCCTACTTCGCCTGACAGCCTCTCCCTCAAGCCCCATCGCTCGTCCGACTTTGAATACTCCGCCATCCGCTCCGCCACGTTCCGCCGCAAGACCGGCCTCACCTTCCGCGACTTCCATCTCCTCCGTCGCATCGGCGCCGGTGACATCGGAACCGTCTACCTCTGCCGGCTGCGCAACAACAGTGCTGCCGCCGATGACGATCGGTTCGTCGCCGGCGCGGAGGACGACGTCGTTGTCGACCGCGAGGATGATGGTTACTGCCTCTACGCCATGAAGGTGGTGGACAAAGACGCGGTAGCATTGAAGAAGAAATCTGAGAGGGCGGAGATGGAGAGGAAGATTTTGAAGATGCTGGATCATCCTTTCCTCCCTACGCTCTACGCTGAGTTCGAGGCTTCACATTTCTCTTGCATTGTCATGGAGTTTTGTTCTGGTGGGGATCTGCACTCCCTACGCCATAGACAGCCTCAGAAACGATTCCCTCTTTCCTCTGCAAGGTTTTATGCTGCAGAAGTTCTCGTGGCATTGGAGTACCTTCACATGCTGGGAATCATATACAGAGATCTGAAACCTGAAAACGTGTTGGTTAGATCCGACGGCCATATCATGCTCTCCGATTTTGATCTCTCCATGTGTTCAGACGCAATCCCGGCCGTTGAATCCTCTGACTTCTCTCCCGAAACTGCATTCCCAGACACCTTACCTTACACTCGCTCGCACTCTAATCCCTTTATCTCTTGCCTCCCGAACGGGTTTTTCCGCTCCCGCAAGGTCCAAACCCTTCAACCGAACCGACTTTTCGTGGCTGAGCCAATATCCGCTCGGTCATGCTCCTTTGTAGGCACCCACGAGTACGTCTCGCCGGAAGTCGCCTCCGGCCACTCTCACGGCAACGCCGTCGACTGGTGGTCCTTTGGAATATTCATCTACGAGCTCATGTACGGGAGAACACCGTTTGCAGCGCCATCAAATGAGGCTACCCTCAGAGGCATCATCAAGAAGCCCTTGACCTTCCCTACCGCCACACCGTCTAGCACGCTTGAGCTCCACGCGCGTGACCTAATATCCAGTTTGCTTCACAAAGACCCGACCCGGAGGCTGGGGTCAAAGCGGGGCGCAGCCGAGGTGAAGAAGCACGCGTTCTTTAAAGGTCTGAACTTGGCGTTGATACGGATGATGACGCCACCTGAGGTGCCAGGTTCGAGGAGGCAGAAGACGACGCCGTTAGGTGGTCAGGGGAAGGGAAACGGAAGTAGGACTACTGTTAGGAGACAGCAGCTGCAGCATCCAACGGCGTCATTTGACTACTTCTGA 1446 0.5505 MLDVPGSGRDSELSLEALSSTQRSSMSSESICSTSFSRLSFELLPTSPDSLSLKPHRSSDFEYSAIRSATFRRKTGLTFRDFHLLRRIGAGDIGTVYLCRLRNNSAAADDDRFVAGAEDDVVVDREDDGYCLYAMKVVDKDAVALKKKSERAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHRQPQKRFPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSMCSDAIPAVESSDFSPETAFPDTLPYTRSHSNPFISCLPNGFFRSRKVQTLQPNRLFVAEPISARSCSFVGTHEYVSPEVASGHSHGNAVDWWSFGIFIYELMYGRTPFAAPSNEATLRGIIKKPLTFPTATPSSTLELHARDLISSLLHKDPTRRLGSKRGAAEVKKHAFFKGLNLALIRMMTPPEVPGSRRQKTTPLGGQGKGNGSRTTVRRQQLQHPTASFDYF 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1350 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Lele35g1350 481 SMART serkin_6 82 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1350 481 MobiDBLite consensus disorder prediction 440 481 - -
Lele35g1350 481 Pfam Protein kinase domain 320 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1350 481 Pfam Protein kinase domain 125 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1350 481 PANTHER FLIPPASE KINASE 1-RELATED 22 446 - -
Lele35g1350 481 Gene3D Phosphorylase Kinase; domain 1 80 186 - -
Lele35g1350 481 MobiDBLite consensus disorder prediction 449 481 - -
Lele35g1350 481 MobiDBLite consensus disorder prediction 1 21 - -
Lele35g1350 481 ProSiteProfiles Protein kinase domain profile. 82 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1350 481 Gene3D Transferase(Phosphotransferase) domain 1 319 444 - -
Lele35g1350 481 FunFam serine/threonine-protein kinase D6PK-like 318 444 - -
Lele35g1350 481 FunFam protein kinase PINOID 187 255 - -
Lele35g1350 481 Gene3D Transferase(Phosphotransferase) domain 1 187 255 - -
Lele35g1350 481 SUPERFAMILY Protein kinase-like (PK-like) 59 442 IPR011009 -
Lele35g1350 481 FunFam protein kinase PINOID 2 80 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1350 Lele-ChrLele35 19472325 19474210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1350 10 449 AGC Kinase Gene Family AT2G34650 66.067 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele35g1350 Pkinase 1.1e-29 CL0016