Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1326 ATGACGTCTCGTACCGGAACTTCTAGCGGCAAAACCCGGGTGGGAAAGTTCGAGCTGGGTCGAACACTGGGTGAGGGCAATTTCGCCAAGGTAAAGCTTGCCCGGAATTTCGATACCGGAGAGAATGTGGCCATCAAGATTCTTGACAAGGATAAGCTTCTCAAACACAAAATGGTTCGCCAGATAAAGCGAGAGATTTCAACAATGAAATTGATTAGGCACCCAAATGTCATACGCATGTATGAGGTGATGGCTAGCAAGACAAAGATATATATCGTACTAGAATTTGTGACTGGTGGAGAACTGTTTGATAAAATTGCAAGCAAGGGCAGGTTAAAAGAAGATGAAGCAAGAAAATATTTCCAGCAGCTTATATGTGCTGTGGAATACTGTCACAGTAGAGGTGTTTGCCATAGGGACCTAAAGCCTGAAAATTTGTTGCTGGACGCTAATGGAGTTCTTAAAGTTTCAGATTTTGGATTGAGTGCACTGCCTCAACAGCTTCGAGAAGATGGGTTGCTTCACACAACATGTGGTACACCAAATTATGTTGCCCCTGAGGTGATCCACAACAAAGGCTATGATGGCACAAAGGCAGATCTTTGGTCCTGTGGTGTTATTCTTTTTGTTTTAATGGCTGGCTACTTGCCCTTTGAAGATTCTAACATTACGTCTTTATATAAAAAGATCTTCAAGGCTGATTTCACATGCCCTCCATGGTTCTCATCAAGTGCAAAGAAATTAATCAAGAGAATTCTTGATCCCAATCCTGCTACACGAATAACATTTGCCGAGGTCATTGAGAATGATTGGTTTAAGAAGGGATATGTGCCTCCTAGATTCGAGCAAGCTGCTGTTAGTCTTGATGATGTAGATGCTATTTTCAGCGAATCAGCAGATTCTCGAAATTTTGTTGTTGAGAGGCGAGAAGAGGCACCAGTGGCACCTATGGCTATGAATGCTTTTGAACTTATCTCTACGTCTCAAGGCCTTAACCTTAGCAGTCTTTTTGAGAAACAAATGGGTCTTGTTAAAAGGGAAACAAGATTCACATCCAAATGTCCAGCGAATGAGATAATTTCAAAAATTGAGCAAACTGCAACACCTATGGGTTTTGATGTTAGGAAGAATAACTACAAGTTAAAGCTTCAAGGGGAAAAGAGTGGACGCAAAGGACATCTATCTGTTTCGACTGAGATATTTGAGGTGGCCCCTTCACTTTGCATGGTTGAGCTCCGCAAGTCTGGAGGAGATACTCTGGAATTTCACAAGTTTTACAAGAACCTATCTACGGGTCTGAAAGATGTCGTTTGGAAATCAGAACCTGTAGATGAAGAACCAAAGGGTGGTACTGCAACAAAAAAATAG 1368 0.4189 MTSRTGTSSGKTRVGKFELGRTLGEGNFAKVKLARNFDTGENVAIKILDKDKLLKHKMVRQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASKGRLKEDEARKYFQQLICAVEYCHSRGVCHRDLKPENLLLDANGVLKVSDFGLSALPQQLREDGLLHTTCGTPNYVAPEVIHNKGYDGTKADLWSCGVILFVLMAGYLPFEDSNITSLYKKIFKADFTCPPWFSSSAKKLIKRILDPNPATRITFAEVIENDWFKKGYVPPRFEQAAVSLDDVDAIFSESADSRNFVVERREEAPVAPMAMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKCPANEIISKIEQTATPMGFDVRKNNYKLKLQGEKSGRKGHLSVSTEIFEVAPSLCMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSEPVDEEPKGGTATKK 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1326 455 ProSiteProfiles NAF domain profile. 314 338 IPR018451 GO:0007165
Lele35g1326 455 ProSiteProfiles Protein kinase domain profile. 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1326 455 FunFam Non-specific serine/threonine protein kinase 313 439 - -
Lele35g1326 455 FunFam Non-specific serine/threonine protein kinase 10 312 - -
Lele35g1326 455 FunFam Non-specific serine/threonine protein kinase 8 96 - -
Lele35g1326 455 Gene3D Phosphorylase Kinase; domain 1 6 96 - -
Lele35g1326 455 Gene3D Kinase associated domain 1, KA1 314 439 - -
Lele35g1326 455 Pfam Protein kinase domain 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1326 455 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 11 428 - -
Lele35g1326 455 Gene3D Transferase(Phosphotransferase) domain 1 97 277 - -
Lele35g1326 455 SMART serkin_6 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1326 455 CDD CIPK_C 320 435 - -
Lele35g1326 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Lele35g1326 455 Pfam NAF domain 316 376 IPR004041 GO:0007165
Lele35g1326 455 CDD STKc_SnRK3 16 271 - -
Lele35g1326 455 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Lele35g1326 455 SUPERFAMILY Protein kinase-like (PK-like) 14 290 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1326 Lele-ChrLele35 19301108 19305668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1326 84 451 CBL-interacting serine-threonine protein kinases AT1G30270 83.696 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele35g1326 Pkinase 9.1e-76 CL0016