Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1314 ATGAACCCTCGAAAAACACTCTCTCTCTCTCTCCTGCTACTGCATTTTTTCCTTGTGCCAAGGGATCAGCAGAAACACTGAGCAGCTGCGTCTCTGAGACCTACTCAGCTTGAGCTTATCAAAAGGCATGATTGTGGTATGGAGGAGGATGGGATTCAAGCACAAGCGTGTAAATTCCCAAGAATTGAAAATGGAAGTGCCAGAAACGATTCCTCCAACAACCACAAGATAGGTTCCAATAATATCAACGAAGAAAATGGAGAGCTCAGAAAAAGAAGTGGTGGCGGAGGAGGAGGCAACGATGGAAGCAGCAACCGATTTCACAGTTGGCACCATCACTCTTCTCGAATCATTAGGGTTTCTCGTGCCTCCGGTGGGAAAGATCGGCACAGCAAGGTCATGACTTCCAAGGGTTTAAGAGACCGAAGGGTTCGTCTCTCTGTGACCACAGCGATTCAATTCTATGACCTTCAAGATCGTCTGGGTTATGACCAACCTAGTAAAGCTGTGGAATGGTTAATCAAAGCAGCTTCTGATGCAATTTCTGAGCTTCCTTCTCTGAACAACACGTTCCCTGAGACCCCAAAGCAACCCAACGATGAGAAGAGAGGAGGTGATCAGAAATGTATCGATTCAGTTGATGCAGAAGGAGATGGTGAAGCGAGTTTTCACCAGCAGAATCAGAATCAAAGTCAGAATCTTTCCATGTCTAAGTCTGCTTGCAGTAGTACATCGGATACGAGCAAAGGCTCCGGCTTGTCGCTCTCGAGGTCGGCGATTCGGGTCAAGGCCCGCGAGAGGGCGAGGGAGAGAGCTGCGAAGGAGAAGGAGAAAGAGAATGATGAATCTTGCAATAATATTGCTCATCATTCCCAGAATAATAATAATGTGATCTCCATGGCTCAGACTTCTTTCACTGAGCTTCTCACTGGTGGGATAAACACCAGCGTTGCTGCGAATACTAGTCCGACCGGGTCGGGTCAACAGAATAATCATCATCGGAGTGATGAGGCTGATCTGTTCAACAAAGGAACTAGACATCAATGGAGTATAGCGCCTATGGACTACTTTGGCGCGGGGCTTCTGGGAGGTTCGTCATCTTCAAGAATCCATCATCATCATGATCAATCTTCTGGGTTTTCAGGGCACATCCAATTGGCGAACAATCTTCCTCAGGCAATGTCGATTGCACCATTCGGAGTCCAAAGTGAAAACCACTCAGATCAGCTTCAACATTTCTCGTTCATCCCCGACCATCTTATGCCGACGGTGGTGACGTCGTCGCAGCAGGCCCCTAGCGGCGGGGGTGGGGGTGGGAGCGAGTATAATCTCAACTTCACCATCTCTTCTTCTTCTAATAATTCCGGCAGCTTTGCTGGTTTCAATAGTAGGGGGACCCTTCAGTCCAATTCTCCGTCTCTTCTGCCTCATCATCTGCAGAGGTTCTCACCTTTAGACGGATCGTCCAACTTACCTTTCTTCATCGGAGCCGCTGCAGCTCCGGCCATGGAGAATCACCACCACCATCAGTTCTCGCCCGAATTAGACGGACGCTTGCAGCTCTGCTACGGCGACGGAAGCCGGCATTCAGACCAGAAGGGGAAGGGGAAGAACTGA 1617 0.4904 MNPRKTLSLSLLLLHFFLVPRDQQKHXAAASLRPTQLELIKRHDCGMEEDGIQAQACKFPRIENGSARNDSSNNHKIGSNNINEENGELRKRSGGGGGGNDGSSNRFHSWHHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAASDAISELPSLNNTFPETPKQPNDEKRGGDQKCIDSVDAEGDGEASFHQQNQNQSQNLSMSKSACSSTSDTSKGSGLSLSRSAIRVKARERARERAAKEKEKENDESCNNIAHHSQNNNNVISMAQTSFTELLTGGINTSVAANTSPTGSGQQNNHHRSDEADLFNKGTRHQWSIAPMDYFGAGLLGGSSSSRIHHHHDQSSGFSGHIQLANNLPQAMSIAPFGVQSENHSDQLQHFSFIPDHLMPTVVTSSQQAPSGGGGGGSEYNLNFTISSSSNNSGSFAGFNSRGTLQSNSPSLLPHHLQRFSPLDGSSNLPFFIGAAAAPAMENHHHHQFSPELDGRLQLCYGDGSRHSDQKGKGKN 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1314 538 MobiDBLite consensus disorder prediction 519 538 - -
Lele35g1314 538 ProSiteProfiles TCP domain profile. 126 184 IPR017887 -
Lele35g1314 538 MobiDBLite consensus disorder prediction 185 290 - -
Lele35g1314 538 MobiDBLite consensus disorder prediction 221 255 - -
Lele35g1314 538 Coils Coil 262 282 - -
Lele35g1314 538 MobiDBLite consensus disorder prediction 65 84 - -
Lele35g1314 538 MobiDBLite consensus disorder prediction 315 341 - -
Lele35g1314 538 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 67 449 IPR005333 GO:0003700
Lele35g1314 538 MobiDBLite consensus disorder prediction 315 331 - -
Lele35g1314 538 ProSiteProfiles R domain profile. 258 276 IPR017888 -
Lele35g1314 538 MobiDBLite consensus disorder prediction 196 218 - -
Lele35g1314 538 Pfam TCP family transcription factor 125 278 IPR017887 -
Lele35g1314 538 MobiDBLite consensus disorder prediction 63 131 - -
Lele35g1314 538 MobiDBLite consensus disorder prediction 260 285 - -
Lele35g1314 538 MobiDBLite consensus disorder prediction 363 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1314 Lele-ChrLele35 19221247 19224338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1314 87 538 TCP Transcription Factor Family AT4G18390 43.524 2.24e-82 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele35g1314 TCP 1.6e-40 No_clan