Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1295 ATGTTTCCGAGACTAATACAACCCCATGAAAGTTTAATGGATGATTTGGAGGTTGCTTCGAACCTCAACAATCACAAGGGGGACCCATGCCTGGTTTTGACCGCCGATCCCAAACCTCGCCTCCGATGGACCCAGGACCTCCATGAACGATTCGTCGATGCTGTCACCCAGCTCGGGGGTGCTAGTAAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCTCTTTCATTTGAAGAGCCATCTTCAGGTCTATTTTCACATTATGAAATACAGACTTGGTAAACAATCAGGGAAAGATATGGGTGAAGGATGCAAAGATGGGATGTTAGGCTCTTATCTTCTAGAAAGCCCCGGTACTGATAACAGCTCTCCAAAGTTGCCAGCTTTTGACACAAATGAGGGTCATGAGATCAAAGAGGCGTTAAGAATTCAGATGGAAGTGCAAAGTAAACTTCATTTGCAAGTAGAGGCAGAGAAGCACTTGCAGATTTGCCAAGATGCAGAGAGGCGGTACATGGCCATGCTTGAAAGAGCTTGCAAAATGCTAGCCGATCAATTCATCAGCACGACGGTTATAGAGCCACCAGATGGACAAAAAGTTCAAGACCTTGTTGGAAGTAAAGCACCGAGAGGTTCCCTGGTTGATTCTCTAGGATTCTACTCCTTACCATCTGCTGAGGCAGCTGGAGTGCATGTCTCGGAGGAAAAAATCATGCCTAGTTTCGAGCGGCCTAGGACCGGATGCTCCACGGAAAGTTGCCTAACATCACACGAGAGTTCTAATGGGCTCGCTTCAGAAGGATCTCCAGATGGAGGTAAAAAGAGAATGCTGAGCTTGGACCCTATGGCACCACCACCATTGATCTGGAGTGAAGCCAAAATGAGAGTTCAAGACTTGAATGTAGCCCAAGGTAATCTTCATGGAATAACCAGGTGCTCTGATGAGAGAGAAGGAGATAATGCAATAGGTCCTACATCTTATATCTCCATTACTAGAGAACATCCGTACCTGGTGTGGTGCTGGCTTTGTTATACTGCATCTGAAAGATTTTCATTGACTTTTTCTCTTCTATCGAGGGAGAAAGAGAGTAGAAGACGTAGCAGAAGAGCACAGCACAGCTCCGATATTGAAGGGGGCAAAGTTTTTGTATGTGTTGGGTTTCGTAGATCTGGCAATTTATTAGTTCATGGTCAGCATTTAGATTGCGGTCGTAGTGCAATGGATCCTCTCAATGGAGGTAACAATCCTACCAACAACCCTAATCTCAGCTCGAAGCAACGTTTACGCTGGACACATGAGCTGCATGAACGTTTTGTTGATGCTGTAGCACAACTTGGTGGGCCAGATCGTGCCACACCTAAAGGTGTCCTCAGAGTTATGGGGGTGCAAGGCTTAACAATATATCATGTCAAAAGCCATTTACAGGTTCAGAGACAACTTCAACTACGGATAGAAGCCCAGGGTAAATACCTGAAGAAGATAATCGAAGAGCAGCAGTGGCTCAGTGGAGTTCTGTCAGACTCACCTTCACCTTGCTCAGGTGTTGGTGCTCCGGCATCGGCTGATGGATGTCAAGAACCTGAGAATAAGACTGACCCCCCGGCTACCCCGGCTCCAACCTCTGAGTGCCCCCTCCTAGATAAAGCGGCAAAAGAACGCACCCCAGCAAAGAGTCTGTCTATCGATAAATCGTTCTCATCTCACCATGAACCATTGACTCCGGATTCTGGTTGCAATGGCGGGTCGCCTACTGACAGCCCTAGAGGGGAGAGATCGACGAAGAAGCACCGGGTAAGCATGGAGGGAGCATATTGTAAATCAGAAATGATGCTTTCACCCCAGATACTAGAATCAAGCATGCCATCATACCAGCAGTCAAACAATGTTTTCCTTACCGGAGAGCAGTTTGATCCTTCATTGGGTATATCTACCAGGAGTGAGGAGGCATTACAAAAGATTTCCCGTGCAACTCATATTTTGAACGGGAAAAATGTTGCACGTAATGTAAATTCTCATATATATGCTTGCGAACTGCAAAGCTCGGTGAATTGCAGACGCAGATCAGGGCCTTATCACAAAGACCTAACTGGCGAAACAGCTGCTCTGCCTTGCCATATTGATAAATTTTCCTTCTTTAACGAAGGAGCAATTGGAGAAGAACGGAGGGTATTAATAGGATAA 2199 0.4625 MFPRLIQPHESLMDDLEVASNLNNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQVYFHIMKYRLGKQSGKDMGEGCKDGMLGSYLLESPGTDNSSPKLPAFDTNEGHEIKEALRIQMEVQSKLHLQVEAEKHLQICQDAERRYMAMLERACKMLADQFISTTVIEPPDGQKVQDLVGSKAPRGSLVDSLGFYSLPSAEAAGVHVSEEKIMPSFERPRTGCSTESCLTSHESSNGLASEGSPDGGKKRMLSLDPMAPPPLIWSEAKMRVQDLNVAQGNLHGITRCSDEREGDNAIGPTSYISITREHPYLVWCWLCYTASERFSLTFSLLSREKESRRRSRRAQHSSDIEGGKVFVCVGFRRSGNLLVHGQHLDCGRSAMDPLNGGNNPTNNPNLSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQVQRQLQLRIEAQGKYLKKIIEEQQWLSGVLSDSPSPCSGVGAPASADGCQEPENKTDPPATPAPTSECPLLDKAAKERTPAKSLSIDKSFSSHHEPLTPDSGCNGGSPTDSPRGERSTKKHRVSMEGAYCKSEMMLSPQILESSMPSYQQSNNVFLTGEQFDPSLGISTRSEEALQKISRATHILNGKNVARNVNSHIYACELQSSVNCRRRSGPYHKDLTGETAALPCHIDKFSFFNEGAIGEERRVLIG 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1295 732 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 482 657 IPR044848 GO:0003700
Lele35g1295 732 MobiDBLite consensus disorder prediction 565 593 - -
Lele35g1295 732 SUPERFAMILY Homeodomain-like 429 485 IPR009057 -
Lele35g1295 732 MobiDBLite consensus disorder prediction 511 604 - -
Lele35g1295 732 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 431 485 IPR006447 GO:0003677
Lele35g1295 732 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 38 92 IPR006447 GO:0003677
Lele35g1295 732 FunFam Myb family transcription factor 430 488 - -
Lele35g1295 732 MobiDBLite consensus disorder prediction 251 272 - -
Lele35g1295 732 SUPERFAMILY Homeodomain-like 38 95 IPR009057 -
Lele35g1295 732 Pfam MYB-CC type transfactor, LHEQLE motif 142 187 IPR025756 -
Lele35g1295 732 Pfam MYB-CC type transfactor, LHEQLE motif 478 505 IPR025756 -
Lele35g1295 732 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 428 488 IPR017930 -
Lele35g1295 732 MobiDBLite consensus disorder prediction 248 285 - -
Lele35g1295 732 Pfam Myb-like DNA-binding domain 434 482 IPR001005 -
Lele35g1295 732 Gene3D - 430 487 - -
Lele35g1295 732 Gene3D - 37 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1295 Lele-ChrLele35 19041609 19057879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1295 406 481 G2-like Transcription Factor Family AT3G24120 59.302 5.27e-23 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele35g1295 Myb_DNA-binding 1.6e-06 CL0123