Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1292 ATGGCAACTGAAAGTGGTGATCATAAGCTAAAGCTGTATTCGTATTGGAGAAGCTCATGCGCGTTTCGAGTCCGAATTGCCCTCAACCTGAAAGGGATAGAATATGAGTACAAAGCGGTCAATTTGCTTAAGGGAGAACAATCTGACCCTGATTTCCTGAAGCTCAATCCTCTCGGTTTTGTTCCTGTCCTCGTGGATGGGGACTTTGTAATTTCTGACTCTTTAGCCATCGTTATGTATCTGGAGGATAAGTTTACTCAGCGTCCATTGCTGCCTCCTGATATACAGAAAAGAGCAATCAATTTCCAGGTTGTGCATATTGTTTCCTCCTCTATACAGCCCTTGCAAAACCTCGGTGTATTGAACTATATTGGGGAAAGAGTTAGCCCTGATGAAAAGCTTCCTTGGGTCCAAAGTGTTATACGAAAAGGCTTCACTGCTATTGAAAAACTATTGAAAGGCCACGCAGGAAGATATGCTACTGGAGATGAAATTTTCCTGGCAGATGCGTTTTTAGCACCTCAATTACTTGCTGCGACGACCAGGTTCCATGTTGACATGACAGAGTTCCCTGTTCTAGCAAGATTGGGGGAAACTTACAATGATGTCCCGGCAATCCGAGAGGCTTCGCCTGAGAACCAGCCAGACTCTCCCACTCGAGGAACCTAG 669 0.4514 MATESGDHKLKLYSYWRSSCAFRVRIALNLKGIEYEYKAVNLLKGEQSDPDFLKLNPLGFVPVLVDGDFVISDSLAIVMYLEDKFTQRPLLPPDIQKRAINFQVVHIVSSSIQPLQNLGVLNYIGERVSPDEKLPWVQSVIRKGFTAIEKLLKGHAGRYATGDEIFLADAFLAPQLLAATTRFHVDMTEFPVLARLGETYNDVPAIREASPENQPDSPTRGT 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1292 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 94 219 IPR010987 -
Lele35g1292 222 SFLD Glutathione Transferase (cytosolic) 10 195 IPR040079 -
Lele35g1292 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 89 IPR004045 -
Lele35g1292 222 Gene3D Glutaredoxin 7 91 - -
Lele35g1292 222 TIGRFAM maiA: maleylacetoacetate isomerase 11 217 IPR005955 GO:0003824|GO:0005737|GO:0009072
Lele35g1292 222 FunFam Maleylacetoacetate isomerase 93 220 - -
Lele35g1292 222 CDD GST_N_Zeta 10 82 IPR034333 -
Lele35g1292 222 SFLD Main (cytGST) 10 195 - -
Lele35g1292 222 Pfam Glutathione S-transferase, N-terminal domain 9 82 IPR004045 -
Lele35g1292 222 CDD GST_C_Zeta 96 214 IPR034330 -
Lele35g1292 222 FunFam Glutathione S-transferase Z1 8 92 - -
Lele35g1292 222 PANTHER MALEYLACETOACETATE ISOMERASE 10 217 - -
Lele35g1292 222 SUPERFAMILY Thioredoxin-like 6 92 IPR036249 -
Lele35g1292 222 Gene3D - 92 220 - -
Lele35g1292 222 SUPERFAMILY GST C-terminal domain-like 89 218 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1292 Lele-ChrLele35 19016821 19021400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1292 9 219 Glutathione S-transferase Gene Family AT2G02380 61.137 4.54e-98 283