Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1291 ATGGATGAAAGAGTATCAGTGCTACTGGTTCTTGTTTTCGCCTTTTCTCTGGTTGCACAAGCAGAAACAGTTCATGAGGATTTTATAGCTCTGAAGTCTCTAATGGATACATTGAAGAACACTCCTGCTAGTTGGTCGGGTTCGGATCCTTGCAATGATCGTTGGGATGGAATCAAGTGCACCAACTCTCGTGTTACTTCGATAAAATTATCAAGCACAGATTTGAAAGGCCAGCTATCAGGAGATATTGGTTTACTATCTGAATTAGAAACACTGGATCTCTCTTACAACAAGGGCTTAACTGGTTCACTTCCTCCAGAAATTGGAAACTTGAGGAAACTGTCCAACTTGTTTCTTGTTGATTGTAGTTTCACTGGTCCTATTCCAGATAATATAGGATCCCTGCAGCAGCTTGTTTTCTTATCTTTGAATAAAAACAGATTTTCCGGGAAAATTCCTGCTTCAATTGGTAATCAGTCAAAACTTACTTGGCTAGATTTAACTGAAAATGATCTTGAAGGGCCCATCCCAGTATCAAGTGGCAGTATGGCTGGTCTTGATAAGCTACTCAATGCAAAGCACTTTCATCTTGGAAAGAACAAGCTTTCTGGAAAAATCCCCCCTCAGCTTTTTAGCTCAGAAATGACTCTAATTCATGTGCTTTTGGACAACAATCAACTTACAGGCAACATTCCTTTAACACTTGGACTTGTTCAGACTCTGGAGGTGATGCGCTTTGACAATAATTCCTTAAGTGAACACTTGCCTCAAAATATCAACAATCTCAAGAATCTTCAGGAGATGTACTTGTCCAACAATAAGCTGTCTGGTCCTATTCCAAGCATGAGTGGAATGAACATGCTCACATACATTGATATGAGCAACAATAGCTTTGATCCTTCAGATTTTCCACCATGGCTTCCTACTCTAAGGAATTTAACAACATTAAAGATGGAGGGCACTCAACTTACAGGGGAGATTCCTGCTACTTTCTTCAGTCTTGTCAATTTACAGAATGTGGTGCTAAATCGTAATAATCTCAATGGCTCCTTGAACATTGGCACCACCTACAGCAAGCAACTGAAACGAATTCAGTTGCAGGATAACAAAATTGACAAATTTGAGCAACAAAATCTTGTCTCCAAAATTAAGATAATACTGGTGAACAATCCTATTTGCTATGAAGGGGGAGAAACAAGAAGTTACTGTTCTGATGTATCAGCCAATATAACATATACAGAACAACCACCAAGTTTTTGCCCTCCTATTACCTGCAGATCAGAACAGAATCTCAGTCCACACTGCAAATGTGCATATCCATTCATGGGAATTTTAAGTTTCAGAACACCTTCGTTCCCAGACTGGCAAAAATATAATCACTTTGAGGAACTTCTAATGAGTGATTTTAAAGCTAAATATCTACCTGTCGATTCAGTTTCTCTGAAAAATCTGACCCAGAATCAATTTCAAGATGTTGAATTGAGCTTGCTAGTGTTTCCTTCAAGTGAAGATCATTTCAACAGAACTGAGATTTCTAGTATAACTTCTCTGCTAAGCAACCTGACCACTTATCCATTCTATTTCTTTCCATGCCCTTATGGACACTATGAAGAACCTATGGAATCAAGTAAATCGTCAAATGTTGCTTTGATAACTGGAGCAATTGTTGGTTGTTCTGTTGTTCTGGTCTTACTACTTTTTGCTGGGATTTATGCTTTCTACCAAAAGAAAAGGGCAGAAAAAGCAATTTCTCAAAGCAATCCTTTTGGACGACGGGCATCTAATGACAACAAAATTATGACCCCTCAATTGAAAGGAGTAAGGCAATTCTCTTCTGCAGAGGTTAAGAAATACACCAGAAACTTTTCTCAAGACAATGTTATCGGATGTGGGGGTTATGGAAAGGTTTATAAAGGGACACTTCCGAATGGGAAACTAGTAGCCATAAAAAGAGCTGAAAAAGAATCTAAGCAGGGAGGGCTTGAGTTTAAAGCTGAGATTGAACTTCTGTCAAGGGTCCACCATAAGAATCTTGTAAGCCTTGTGGGGTTTTGCTTTGAGCGAGGAGAACAAATGCTGGTTTATGAGTATGTCCCTAATGGAACTTTGTATGATACTATCTCAGGGAAATCAAGACTTAGATTGGACTGGCCCAGAAGGCTAAAGGTAATCCTTGGTGCTGCTAGAGGTTTAGCTTATCTTCATGATCACGCAAATCCTTATATCATACATAGGGACATAAAGTCAAGTAACATCCTGCTGGATGATCGCTTAAATGCTAAAGTAGCTGATTTTGGGATTTCAAAGAATATGGTTGATTGTGACAAAGATCATATCACCACTCAAGTTAAAGGAACAATGGGCTATTTAGATCCAGAATACTACACAAGTCAGCATCTGACCAAAAAGAGCGATGTTTACAGCTTTGGAGTTTTGATGCTGGAGATGATAACAGCAAGAAAACCTATAGAAAAAGGGAAATACATTGTGAAAGTGGTTAGGAATTCAATTGATAGAACAAAGGAGTTATATGGTCTTGAAGAAATTATTGACCCAGTCATTGGTTCAGAATTAACACCGAAGGGTTTAGAGAAGTTTGTGGATCTCTCGATGAAGTGTCTTCAAGAGACTGGTGCTGACCGGCCTTCGATGAACGAAGTGGTAAAAGAAATTGAAAGCATTTTGTATATAACTGGTTTGCACAACGCTTCTGGATCAATAGCATCTACTTCACCTAGTTATGATGAGATAACAAGTTGGGGTTCTCAGAATCTTTACAGCAATAACTCCTTTGACTCAGGTGCAGTACCCCTGCAACCAAAAATTGAGCCTAAAATGTTTAAGAATGCTGTTGAGGAGAATATACGAGGCTTCAGAATTTATGTTACTGAGTTGAAAGAACTAGTGGCGAAACTGAATTACCAAAAGCAGCTTCTGGTTTGCCAGGTGTCATCAGATCACTACACAGACAAACCTACTGGGAGCATACTCAACACTTCTATCAATGTCTTTCACTTGTATGTAGACAAGTGGGTTATAAAAACTTGGGGCGATGTTAGCCATCTGAACCAAACAAGATTTCTGCAGTCTGGTTTTAGAGGAAGTTTCACGAACACTAGGGATGCAAGCAAAGATTCTGACTTACCCAAGAATGCAAATGAGAGAATGAAGGCAATGGAGCAATCATTGATGAAAGGAAGCCAAATTCAAGATGATTGTGCTGCTATTGTGAAGAAGCTTCCTGCTATGATCCACTCAACAGAGGAGCAGTTTTGGGCGCACAAGAAGCAGACCTTGTTCTTGACACAATTGACAGCAAAAACACTGCCTAAAGTTGCTTGTCAGAATGGACAGCGCACAAATGTGTTTCGCCATTCATGCATGTATTTAAAGCTTGGTTATCGCTCTGACACATTTGTTGGTACTGCTCTTATTGATGCCTACTCTGTTTGTGGATGTGTTGATATTGCTAGAAATGTTTTTGACAACATTCTTTATAAGGACATGGTCACTTGGGCTGGCATGGTAGCTTGCTATGCTGAGAATGACTGCTTTGACCCTTCATTACAACTTTTCTCCCATACGAGTCTAATAGGTTACGAACCAAACAACTTTGTCATCACTGCGGTGCTCAAGTCCTGTCTTGGCCTACAGGCCTTTCGCCTTGGCATGAGTATTCATGCATGTGTTTTGAAAACTCATTATGAACAGGATCTTTATGTTGGGCTTGCATTGCTGGAGTTGTATAGTAAGTCCCAAGACCTTGATTCTGCACGGCAATTTTTCGAGGAAATGCCTAAAAATAATCTTATTCCTTGGAGTCTAATGATCGCTCGGTATGCTCAGAGTGACAAAAGTAGAGAGGCTTTGGAATTGTTCCAGCGTTTGAGGCAAATATCCATTGTCCCTAATCAGTATACATTCGCTAGTGTGTTGCAAGCTTGTGCCACTTTACCTGCATTAAATTTGGGAGAGCAAATTCCTTCTTATGTCCTGAAAGTTGGTCTTGACTCAAATGTGTTTCCAACTGAAGTGACACAAGGACATCGGGTTCATTCTTTAACTGTCAAAACCATATATGATAAGGACACTGTAGTTGCCAATTCATTGGTAGATATGTATGCCAAATGTGGCAGCATTCGTGATGCCCGAATAGTATGTGATAAGATGGGAAAACGAGATGAAGTTTCATGGAATGCTATGATCTGTGGATATTCCATGCATGGCCTAGGTGTGGAGGCTCTAAATATATTTGAAATGATGCAACAGTCTAATTGTAAACCAAATAAACTAACATTTGTTGGTGTCCTTTCTGGATGTAGCAATGCAGGACTGCTAGATAAAGGACAAGTGCTATTTAAGTCAATGATGCAGGACTATGGCATCGAACCATGTATAGAACATTATACTTGTATGGTTTGGCTTCTTGGAAGGTCAGGCCATCTTGAGAAAGCAGTGAAACTCATTGTTGAGATTCCATTTCAGCCTAGTGTTATGGTGTGGCGAGCGTTGCTTGGTGCTTTTGTCATTCATAACGATATTGATCTTGGAAGAGTTTGTGCCCAACGTGTACTTGAGATGGATCCACATGATGATGCAAACATGTATCATTCATAA 4617 0.3968 MDERVSVLLVLVFAFSLVAQAETVHEDFIALKSLMDTLKNTPASWSGSDPCNDRWDGIKCTNSRVTSIKLSSTDLKGQLSGDIGLLSELETLDLSYNKGLTGSLPPEIGNLRKLSNLFLVDCSFTGPIPDNIGSLQQLVFLSLNKNRFSGKIPASIGNQSKLTWLDLTENDLEGPIPVSSGSMAGLDKLLNAKHFHLGKNKLSGKIPPQLFSSEMTLIHVLLDNNQLTGNIPLTLGLVQTLEVMRFDNNSLSEHLPQNINNLKNLQEMYLSNNKLSGPIPSMSGMNMLTYIDMSNNSFDPSDFPPWLPTLRNLTTLKMEGTQLTGEIPATFFSLVNLQNVVLNRNNLNGSLNIGTTYSKQLKRIQLQDNKIDKFEQQNLVSKIKIILVNNPICYEGGETRSYCSDVSANITYTEQPPSFCPPITCRSEQNLSPHCKCAYPFMGILSFRTPSFPDWQKYNHFEELLMSDFKAKYLPVDSVSLKNLTQNQFQDVELSLLVFPSSEDHFNRTEISSITSLLSNLTTYPFYFFPCPYGHYEEPMESSKSSNVALITGAIVGCSVVLVLLLFAGIYAFYQKKRAEKAISQSNPFGRRASNDNKIMTPQLKGVRQFSSAEVKKYTRNFSQDNVIGCGGYGKVYKGTLPNGKLVAIKRAEKESKQGGLEFKAEIELLSRVHHKNLVSLVGFCFERGEQMLVYEYVPNGTLYDTISGKSRLRLDWPRRLKVILGAARGLAYLHDHANPYIIHRDIKSSNILLDDRLNAKVADFGISKNMVDCDKDHITTQVKGTMGYLDPEYYTSQHLTKKSDVYSFGVLMLEMITARKPIEKGKYIVKVVRNSIDRTKELYGLEEIIDPVIGSELTPKGLEKFVDLSMKCLQETGADRPSMNEVVKEIESILYITGLHNASGSIASTSPSYDEITSWGSQNLYSNNSFDSGAVPLQPKIEPKMFKNAVEENIRGFRIYVTELKELVAKLNYQKQLLVCQVSSDHYTDKPTGSILNTSINVFHLYVDKWVIKTWGDVSHLNQTRFLQSGFRGSFTNTRDASKDSDLPKNANERMKAMEQSLMKGSQIQDDCAAIVKKLPAMIHSTEEQFWAHKKQTLFLTQLTAKTLPKVACQNGQRTNVFRHSCMYLKLGYRSDTFVGTALIDAYSVCGCVDIARNVFDNILYKDMVTWAGMVACYAENDCFDPSLQLFSHTSLIGYEPNNFVITAVLKSCLGLQAFRLGMSIHACVLKTHYEQDLYVGLALLELYSKSQDLDSARQFFEEMPKNNLIPWSLMIARYAQSDKSREALELFQRLRQISIVPNQYTFASVLQACATLPALNLGEQIPSYVLKVGLDSNVFPTEVTQGHRVHSLTVKTIYDKDTVVANSLVDMYAKCGSIRDARIVCDKMGKRDEVSWNAMICGYSMHGLGVEALNIFEMMQQSNCKPNKLTFVGVLSGCSNAGLLDKGQVLFKSMMQDYGIEPCIEHYTCMVWLLGRSGHLEKAVKLIVEIPFQPSVMVWRALLGAFVIHNDIDLGRVCAQRVLEMDPHDDANMYHS 1538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1291 1538 Gene3D Phosphorylase Kinase; domain 1 592 697 - -
Lele35g1291 1538 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1429 1464 IPR002885 -
Lele35g1291 1538 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1394 1428 IPR002885 -
Lele35g1291 1538 SMART serkin_6 622 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1291 1538 CDD STKc_IRAK 628 894 - -
Lele35g1291 1538 SUPERFAMILY L domain-like 30 298 - -
Lele35g1291 1538 FunFam Leucine-rich repeat family protein 26 181 - -
Lele35g1291 1538 FunFam Pentatricopeptide repeat-containing protein, chloroplastic 1365 1537 - -
Lele35g1291 1538 Pfam PPR repeat family 1394 1441 IPR002885 -
Lele35g1291 1538 Gene3D Tetratricopeptide repeat domain 1220 1322 IPR011990 GO:0005515
Lele35g1291 1538 Gene3D Tetratricopeptide repeat domain 1101 1219 IPR011990 GO:0005515
Lele35g1291 1538 Pfam Protein kinase domain 623 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1291 1538 PANTHER RECEPTOR-LIKE PROTEIN 55 32 894 - -
Lele35g1291 1538 Pfam PPR repeat 1366 1393 IPR002885 -
Lele35g1291 1538 Pfam PPR repeat 1273 1298 IPR002885 -
Lele35g1291 1538 Pfam PPR repeat 1468 1491 IPR002885 -
Lele35g1291 1538 Pfam PPR repeat 1244 1269 IPR002885 -
Lele35g1291 1538 SUPERFAMILY Protein kinase-like (PK-like) 598 891 IPR011009 -
Lele35g1291 1538 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1269 1303 IPR002885 -
Lele35g1291 1538 Gene3D Ribonuclease Inhibitor 25 182 IPR032675 -
Lele35g1291 1538 Gene3D Ribonuclease Inhibitor 183 282 IPR032675 -
Lele35g1291 1538 ProSiteProfiles Protein kinase domain profile. 622 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1291 1538 TIGRFAM PPR: pentatricopeptide repeat domain 1396 1429 IPR002885 -
Lele35g1291 1538 FunFam Leucine-rich repeat protein kinase family protein 182 281 - -
Lele35g1291 1538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
Lele35g1291 1538 FunFam receptor-like protein kinase FERONIA 586 697 - -
Lele35g1291 1538 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 698 906 - -
Lele35g1291 1538 FunFam Pentatricopeptide repeat-containing protein mitochondrial 1222 1320 - -
Lele35g1291 1538 Gene3D Ribonuclease Inhibitor 283 415 IPR032675 -
Lele35g1291 1538 ProSitePatterns Protein kinases ATP-binding region signature. 628 650 IPR017441 GO:0005524
Lele35g1291 1538 Gene3D Tetratricopeptide repeat domain 1372 1538 IPR011990 GO:0005515
Lele35g1291 1538 Gene3D Transferase(Phosphotransferase) domain 1 698 902 - -
Lele35g1291 1538 SUPERFAMILY L domain-like 217 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1291 Lele-ChrLele35 19002532 19014532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1291 5 945 Receptor kinase-like Gene Family AT1G79620 48.744 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lele35g1291 Pkinase 6.2e-48 CL0016