Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1290 ATGTATGCCACGGCAAGGAGATGGGACGGTGTTGCTTCTGTTAGAAAAATTATGCACACGAAAAGAGTCAGGAAGGAGCCAGGGTTAAGTTGGATCGAGGATCAAGGTGTGGTTCACTATTTTACTGCAGGGAACACTAATCATCCTGACATTAAACTTATCAGTGCAATGCTTGAATGGTTAAACATGAAGACCAGGGAGGAAGGATATGTACCCAATATCAATGCTGTTTTGGTTGATATGGAGGATGTTGAAAAAGCACGTCTCTTGTGGGTTCACAGTGAAAGATTAGCTCTGGCATTTGGACTGATTCCATTGCCACGTGTTCCAGAATCACAAATTCCTTATTTTCATTTGCTGTTGCCTGCAAGAAATTCTTGTTCACTTGAAGACCATTCGCTTTACCTTTTTCTCTATTCAGATCTTACTCTTCCGTTGCAAAAGAGTGCTACTTTTACGTTGAGAATGGGTGAGAGAAAGGTTCAAGAATTGCTCTCTCTGCCTCTTCTTCTCAACTTATTGTTGCTTTCAGTAGCAGAACCAGCATCCATGGAGGCTGTGAGCGCCCTAACTTCTCTGAAGAACCTAATGCGAACCGTACCCCAAAGTTGGGAGAGTTCGGATCCTTGCAATGGCTGGGAGGGAATTACCTGCACCCTATCACGTGTTACTTCCATAAAATTAGCAGGCATGGATTTAAATGGCCAGCTTTCTGCAGATATTGGATCCTTCTCCGAGTTACAGGCTTTGGATTTGTCTTACAATAAATACCTAGGAGGACCACTTCCAAAAGAAATTGGAAATTTGAAGAAGCTGGAGGAATTATTTCTTGTTGATTGTGGTTTCACTGGTCCTATTCCAGATGAAATTGGATCCCTACCAGAGCTTACCTATCTATCTTTAAACTCAAACAGCTTTAGTGGAAGAATTCCAGCTTCCATTGGCAATCTTTCAAAAATGCGACGGCTAGACTTAACTGATAATCAACTTGTTGGACCTCTTCCAGTATCATCAAGTGGAGCCACGTCTGGTTTAGATATGCTACGCAATGCACTGCACTTTCATCTTGGGGACAACCACCTCTCAGGAGATATTCCTCCAGAACTTTTCAGCTCAAATATGGCTCTGATACATTTGGTCTTGAATAGCAATAACCTTACCGGCAAAATTCCCGATTCACTTGGACGCGCTCAAAATCTTACGGTGGTGCGCTTGGAAAATAATTTGTTGACTGGCTTTGTACCTCAGAACCTGACTCACCTCCACAATGTTACAGACCTGATCCTGTCCAACAATAATCTATTGGGTACCATTCCAAACCTCAGTGGAATGACTGCTCTCCAATACTTGGATATGAGCAACAATAGCTTTGAGCCATCTGAATTTCCATCATGGCTTCAAAATTTACCATGGTTAAAATCACTAAAAATGGAGAACACGAATCTTAAAGGGAAGATTCCTGCTGCTTTTTTTAGTCTAGCCAATTTAAATACTGTGGTTCTGAAAGACAATAAACTCAGTGGAAGCCTGGACATTGGCACCAACTACAGCAAACAACTTCAACTGATTGATTTGCAGAATAATAATATTGAGGATTTTCACAAACAAGATGAAGCCTTTGGGATCACAATTATACTCGTGGGCAACAATGCTTGTTATGAAACTGGTTCTGAAACAAGCACCCTCTGCACCTTTCATGATAAACAACCTGCAGAATTGCCCAAGAACTGTATGCCTGTTAAATGCAGTGTCCCAAATCAGATTTCTAGTCCCAATTGCAAATGCTCATATCCATACGAAGGAACTTTTTCTTACATAGCTCCTTCTTATGTGATAAACAAAACTGCCCTCGAGGGAATTCTTTTGGAAAATTTCCAATCCTGTCATCTACCTGTGGACTCTGTTTCTGTGTTTAATCCACCTTGCTCTCCATTTCAGTGTTTAAAAGTCACTGTACAAATCTTCCCTTCAGGCCAGGACCACTTCAACCAAACAATGATATCTAAAATAAGCGTGCTGCTAAGTAATCTCAGTACAATTGAAGCATATACTTTCATTCTTGGTCTTGATAAATATGGACTTGAAAGTTCAAGTGAGTCATCAAACACCAGAATCATAATTGGAGCTGCCGTTGGTGGTTTTGTGTTGCTTGTGCTATTTCTCCTAGCAGGTGTTTATGCTTTTTGCCAAACAAGAAGAGCAGAAAAAGCAATTGAAGAAAGCAATCCATTTGGACACTGGCATCTAAGTCACGACAGTAGTACAAAACCTCAGTTACATGGAGCAAGGAGGTTCTCTTTCAAAGAACTTAAAGAATACACAAACAATTTTTCACAAGCCAATGAGATTGGATCTGGGGGTTATGGGAAGGTTTCTCGGGGAACTCTTCCCAATGGACAACTGGTTGCAATTAAACGAGCTCAGAAACAATCAAATCAAGGGGGACTTCAGTTTAAAGCTGAGATTGAACTCCTTTCAAGAGTCCACCATAAGAATCTGGTTAGCCTTGTGGGATTCTGCTTCGAGCGAGGAGAACAAATGCTAGTTTATGAATTTGTTCCTAATGGAACCTTGAAGGAGAGCATCTCAGAGAAGTTCGGTATAAGATTGGACTGGACTAGAAGGTTAAAAATAGCCCTTGGTACTGCAAGGGGTTTGGCTTATCTCCATGAACATGCCAATCCTCCTATTATACATAGAGACATTAAATCAACCAACATTTTGCTGGATGAACACTTGAATGCAAAAGTTGCCGATTTCGGTCTTTCCAAGCCTATGGACAATTCTGAAAAAGATCATGTTACTACACAAGTAAAAGGAACAATGGGCTACTTGGATCCAGATTATTACACAACTCAACAGTTGACTGAGAAAAGTGATGTTTATAGCTTTGGAGTGCTAATGTTGGAGCTGATAACTGCAAGAAAACCAATACAAGGAGGGAAGCATATTGTGAAAGTATTTAGGAGTACAATTGATAAGACAAGAAACTTTCATGGCCTTCAAGAAATTCTTGACCCAGCTCTTGTTGGCTTAGGCTCCCCATTGATGGAACTGGAGAACTTTGTTGATCTTGCAATGATGTGTGTCGAGGATTCAGGAGCCGACCGACCGACGATGAGTGATGTGGTGAAAGGAATAGAAAGCCTGTCGAAATCTGCTAGTTTGAACACTATAGCTGAATCGTCAGCATCTAATTCAGCTAGCTTTGAGGAGGTAAGTAATGTGACTTCACAGCTTGTTCTCAACAGCAATGAGTCTTTGGATTCAAGTTAG 3276 0.4096 MYATARRWDGVASVRKIMHTKRVRKEPGLSWIEDQGVVHYFTAGNTNHPDIKLISAMLEWLNMKTREEGYVPNINAVLVDMEDVEKARLLWVHSERLALAFGLIPLPRVPESQIPYFHLLLPARNSCSLEDHSLYLFLYSDLTLPLQKSATFTLRMGERKVQELLSLPLLLNLLLLSVAEPASMEAVSALTSLKNLMRTVPQSWESSDPCNGWEGITCTLSRVTSIKLAGMDLNGQLSADIGSFSELQALDLSYNKYLGGPLPKEIGNLKKLEELFLVDCGFTGPIPDEIGSLPELTYLSLNSNSFSGRIPASIGNLSKMRRLDLTDNQLVGPLPVSSSGATSGLDMLRNALHFHLGDNHLSGDIPPELFSSNMALIHLVLNSNNLTGKIPDSLGRAQNLTVVRLENNLLTGFVPQNLTHLHNVTDLILSNNNLLGTIPNLSGMTALQYLDMSNNSFEPSEFPSWLQNLPWLKSLKMENTNLKGKIPAAFFSLANLNTVVLKDNKLSGSLDIGTNYSKQLQLIDLQNNNIEDFHKQDEAFGITIILVGNNACYETGSETSTLCTFHDKQPAELPKNCMPVKCSVPNQISSPNCKCSYPYEGTFSYIAPSYVINKTALEGILLENFQSCHLPVDSVSVFNPPCSPFQCLKVTVQIFPSGQDHFNQTMISKISVLLSNLSTIEAYTFILGLDKYGLESSSESSNTRIIIGAAVGGFVLLVLFLLAGVYAFCQTRRAEKAIEESNPFGHWHLSHDSSTKPQLHGARRFSFKELKEYTNNFSQANEIGSGGYGKVSRGTLPNGQLVAIKRAQKQSNQGGLQFKAEIELLSRVHHKNLVSLVGFCFERGEQMLVYEFVPNGTLKESISEKFGIRLDWTRRLKIALGTARGLAYLHEHANPPIIHRDIKSTNILLDEHLNAKVADFGLSKPMDNSEKDHVTTQVKGTMGYLDPDYYTTQQLTEKSDVYSFGVLMLELITARKPIQGGKHIVKVFRSTIDKTRNFHGLQEILDPALVGLGSPLMELENFVDLAMMCVEDSGADRPTMSDVVKGIESLSKSASLNTIAESSASNSASFEEVSNVTSQLVLNSNESLDSS 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1290 1091 Gene3D Phosphorylase Kinase; domain 1 748 852 - -
Lele35g1290 1091 FunFam Leucine-rich repeat protein kinase family protein 746 852 - -
Lele35g1290 1091 Pfam Leucine rich repeat 399 456 IPR001611 GO:0005515
Lele35g1290 1091 Pfam Protein kinase domain 778 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1290 1091 Gene3D Ribonuclease Inhibitor 342 439 IPR032675 -
Lele35g1290 1091 FunFam Leucine-rich repeat protein kinase family protein 341 440 - -
Lele35g1290 1091 SUPERFAMILY Protein kinase-like (PK-like) 763 1057 IPR011009 -
Lele35g1290 1091 Pfam DYW family of nucleic acid deaminases 69 107 IPR032867 GO:0008270
Lele35g1290 1091 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 853 1064 - -
Lele35g1290 1091 Gene3D Transferase(Phosphotransferase) domain 1 853 1074 - -
Lele35g1290 1091 CDD STKc_IRAK 783 1050 - -
Lele35g1290 1091 SMART serkin_6 777 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1290 1091 Gene3D Ribonuclease Inhibitor 185 341 IPR032675 -
Lele35g1290 1091 SUPERFAMILY L domain-like 190 552 - -
Lele35g1290 1091 ProSitePatterns Protein kinases ATP-binding region signature. 783 805 IPR017441 GO:0005524
Lele35g1290 1091 ProSiteProfiles Protein kinase domain profile. 777 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1290 1091 FunFam Leucine-rich repeat family protein 185 339 - -
Lele35g1290 1091 PANTHER RECEPTOR-LIKE PROTEIN 55 195 1050 - -
Lele35g1290 1091 Pfam E motif 1 33 IPR046848 -
Lele35g1290 1091 Pfam Leucine rich repeat N-terminal domain 187 218 IPR013210 -
Lele35g1290 1091 Gene3D Ribonuclease Inhibitor 440 572 IPR032675 -
Lele35g1290 1091 ProSitePatterns Serine/Threonine protein kinases active-site signature. 897 909 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1290 Lele-ChrLele35 18988902 19002506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1290 169 1073 Receptor kinase-like Gene Family AT5G49760 51.029 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lele35g1290 Pkinase 2.6e-46 CL0016