Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1289 ATGGGTGGAAGAATACTGGTATTCCTCCTGCTTGTCAGCAATTATTTGCTGGTTGCAGTAGCAAAAACTGCTACTGAAGATTTGACGGCTCTGAGGTCTCTTATGGATACCTGGCAGAACACACCTCCCAACTGGATGGGATCTGATCCTTGTATTGACTGGAATGGAATTAAGTGCACTGGTTCACGCGTTGTTTCCATATCGTTATCAAGCACTGGTTTGGCAGGCCAACTTTCTGGAGATATTGGATCACTATCTGAATTAGAGACCTTGGATTTGTCGTACAACAAGGGCTTGACTGGATCACTTCCTCAAGCCATTGGAAATTTGAAGAAGCTGTCAACTTTAATTCTTGTTGGTTGTGGTTTCAATGGTCCTATCCCAGAAGAAATAGGAAATCTGCAGGAGCTCTCCTTCCTGTCTTTAAATTCCAATAAGTTTGTTAGACAAATTCCAGCTTCTATTGGTAATCTGTCTAAACTTTATTGGTTAGATTTATCTGACAATCAGCTTGAAGGACCCATCCCAGTATCTAGTGGCAGTAAGTCTGGTCTTGATAGGCTCCATCATGCAAAGCATTTTCATCTTGGCAACAATAAGCTCTCAGGCCCCATTCCTCCTAAACTTTTTAGCTCAGAACTGACTTTGATTCATGTACTTCTTGAAAGTAATAAACTCAGTGGAAGCATCCCATCTACACTTGGACTTGTTCAGAGTCTGGAGGTGGTGCGTCTTGACGGTAATTCTATAAGTGGACCTGTGCCTCCGAACATCAGCAACCTTGTGAAAATTCAACAGATGTACTTGTCCAACAATAAGCTTTCAGGATCCTTGCCAAACCTCTCCGGAATGAGTGTCCTTAGTTACCTGGATATCAGCAATAACAGCTTTTATTCATCGGATTTTCCACCATGGTTTTCAACTATGCAGTCCCTGACAACGTTAAAGATGGAGAACACACAACTTGAAGGACAGATCTCTTCTTCTTTCTTTAGCCTTCCCAATTTACAGACTGTGTCTCTAAAACATAATCAACTAAATGGAACCTTGGACATTGGTACCACCTACAGCAGCCAGCTGCGACTCATTGACTTGCAGGGTAATAACATTGCTGAGCTTGACCAAAATGATGGAGTCCCCAAAGTTAAGATAATACTAAAAGACAGATATGGGCACTTTGGATCTGCGAATCCTAGTAAATCATCAAACGTTGGCATCATGATAGGAGCAGCAGTGGGTGGTTCAATCCTGCTAGTGTTATTACTCCTCGCAGGTGTTTATGCTTGCTTCCAAAAGAAGAGAGCAGAAAGAGAAATTGATCACAACAATCCTTTCAGGCGCCGGGATAGTGAGAGCACTAGTGGTGTCCCTCAGTTGAAAGGAGCAAGGCAGTTCTCATTTGAAGAGATAAAAAAATGCACTTCAAATTTTTCTCAAGCAAACGTGATTGGAACTGGTGGCTATGGGAAGGTTTATAAGGGAACTCTTCCAAATGGACAATTTATAGCCATAAAACGAGCTCAAAAAGAATCTAAGCAAGGAGCACTTGAATTTAAAGCAGAGATTGAACTTCTATCTAGAGTCCACCATAAAAATCTTGTTAGTCTTCTAGGATTCTGCTTTGAGAAAGGAGAACAAATGCTTGTCTATGAGCATGTATCAAATGGGAGTCTGAAGGATACTCTCTCAGGGAGTTCAGGATTTAAATTGGATTGGATCAGAAGGCTAAAAATTGCCCTTGGTACTGCCAGGGGTTTGGCTTATCTTCATGAACATGCCAACCCTCCTATCATACACAGGGACATCAAATCAAACAATATTTTACTGGATGAGCGCTTGAATGCGAAGGTTGCTGATTTTGGTCTCTCCAAGTCTATGGTTGATACTGAAAAAGACCATATTACCACTCAAGTTAAAGGAACAATGGGCTATTTGGATCCAGAGTATTATATGTCTCAACAATTAACTGAGAAGAGTGATGTTTACAGCTTCGGAGTGCTATTGCTGGAGCTGGTAACTGCGAGAAAACCCATAGAAAGAGGGAAATATATAGTAAAAGAGATCAGGACTGCAATTGATAAGAAGAGAGATTTATGTGGTCTTTATGAGTTCCTGGACCCCACCATGGATTTAGGGTCAACACTGATTGGTTTTGAGAAGTATGTAAATCTTGCATTGAAGTGTGTGGAGGAATTAGGTGCTAACAGGCCTGCAATGAGTGATGTGGTGAAAGAGATTGAAAACTTGTTGCTGTTGGCTGGTGCTAACCCTAATGCTGACTCAGCATCCACGTCAGCTAGTTATGCGGATACTAGTAAAGGAAGTTTTCATCATCCTTACAGCAATGAGTCCCTTGATGCAAATGCAGTGCTTCCAAATCCAAAGATTGAACCTATGTAA 2400 0.4142 MGGRILVFLLLVSNYLLVAVAKTATEDLTALRSLMDTWQNTPPNWMGSDPCIDWNGIKCTGSRVVSISLSSTGLAGQLSGDIGSLSELETLDLSYNKGLTGSLPQAIGNLKKLSTLILVGCGFNGPIPEEIGNLQELSFLSLNSNKFVRQIPASIGNLSKLYWLDLSDNQLEGPIPVSSGSKSGLDRLHHAKHFHLGNNKLSGPIPPKLFSSELTLIHVLLESNKLSGSIPSTLGLVQSLEVVRLDGNSISGPVPPNISNLVKIQQMYLSNNKLSGSLPNLSGMSVLSYLDISNNSFYSSDFPPWFSTMQSLTTLKMENTQLEGQISSSFFSLPNLQTVSLKHNQLNGTLDIGTTYSSQLRLIDLQGNNIAELDQNDGVPKVKIILKDRYGHFGSANPSKSSNVGIMIGAAVGGSILLVLLLLAGVYACFQKKRAEREIDHNNPFRRRDSESTSGVPQLKGARQFSFEEIKKCTSNFSQANVIGTGGYGKVYKGTLPNGQFIAIKRAQKESKQGALEFKAEIELLSRVHHKNLVSLLGFCFEKGEQMLVYEHVSNGSLKDTLSGSSGFKLDWIRRLKIALGTARGLAYLHEHANPPIIHRDIKSNNILLDERLNAKVADFGLSKSMVDTEKDHITTQVKGTMGYLDPEYYMSQQLTEKSDVYSFGVLLLELVTARKPIERGKYIVKEIRTAIDKKRDLCGLYEFLDPTMDLGSTLIGFEKYVNLALKCVEELGANRPAMSDVVKEIENLLLLAGANPNADSASTSASYADTSKGSFHHPYSNESLDANAVLPNPKIEPM 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1289 799 Gene3D Transferase(Phosphotransferase) domain 1 553 764 - -
Lele35g1289 799 FunFam Leucine-rich repeat protein kinase family protein 181 280 - -
Lele35g1289 799 MobiDBLite consensus disorder prediction 758 799 - -
Lele35g1289 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 597 609 IPR008271 GO:0004672|GO:0006468
Lele35g1289 799 SMART serkin_6 477 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1289 799 ProSitePatterns Protein kinases ATP-binding region signature. 483 505 IPR017441 GO:0005524
Lele35g1289 799 MobiDBLite consensus disorder prediction 758 788 - -
Lele35g1289 799 CDD STKc_IRAK 483 749 - -
Lele35g1289 799 FunFam Leucine-rich repeat family protein 26 180 - -
Lele35g1289 799 Gene3D Ribonuclease Inhibitor 21 180 IPR032675 -
Lele35g1289 799 Gene3D Ribonuclease Inhibitor 282 386 IPR032675 -
Lele35g1289 799 SUPERFAMILY Protein kinase-like (PK-like) 463 761 IPR011009 -
Lele35g1289 799 Gene3D Phosphorylase Kinase; domain 1 448 552 - -
Lele35g1289 799 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 553 762 - -
Lele35g1289 799 SUPERFAMILY L domain-like 58 375 - -
Lele35g1289 799 PANTHER RECEPTOR-LIKE PROTEIN 55 31 748 - -
Lele35g1289 799 Pfam Protein kinase domain 478 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1289 799 Pfam Leucine rich repeat 287 346 IPR001611 GO:0005515
Lele35g1289 799 FunFam Leucine-rich repeat protein kinase family protein 441 552 - -
Lele35g1289 799 Gene3D Ribonuclease Inhibitor 181 281 IPR032675 -
Lele35g1289 799 ProSiteProfiles Protein kinase domain profile. 477 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1289 Lele-ChrLele35 18976397 18984276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1289 60 798 Receptor kinase-like Gene Family AT5G49760 44.245 4.74e-177 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lele35g1289 Pkinase 3.5e-47 CL0016