Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1288 ATGACCACGGCCGCAACCACCGCCAAGCTCGACGACGGTCACGAGCTCGACATGGTGATGCCGGGGTTCCGATTTCACCCGACAGAAGAAGAACTCGTGGAGTTCTACCTTCGCCGTAAAGTTGAGGGAAAGCGTTTCAACGTTGAGCTCATTACTTTCCTTGATCTTTATCGCTACGACCCCTGGGAGCTTCCAGCTCCTAAAGGTATCAGAACCAGCTGGATCATGAACGAGTATCGCTTACCTCACCACGACACTGAACGATACCAAAAGGCTGAGATATCGCTGTGTCGAGTGTACAAGAGACCAGGAGTGGAAGACTATCCTTCAATTCCTCGTTGTCTGCCAACAAGGCCATCTCCTTCCTCGCGAGCTTCTTCTCACTCTTCAGACAAGAGCATCAGTAAGCTCACCAACGACGTAGAATTTGTCGGACAAATGACGATGATGAATAACTATAATCTTCAGTTAGGAAAAACCTCTTCAGATAATAATCAAGGTGTCTCTATAGCTCTAGGGCTTTCCAAAGTACAATGCAATCCTGCTCCTTCTTACCCTAATTCCTCAGCTTCAACAATGGCTCCTCCATTTCCATTAATTGAGGACGAAGAGTTACTGATGCTCACCAATATGCAGCCATTGATAATGAAGCAAACTCAAGCTCCTTCTTCCTCCTTCTTCCTCTCACCACCTGGTAATAATAATCATAATAATAATTCTTCTTCAGCTTCTTCATCCAACGTGGAGGATCTCAATAGGTTGTTGAGTTATAATCAGCTGCAACAATACTTCAACAGTAACAATGCTGCTCCAAGCCATCATCAACAACAGCAACAACAGTTCTCTAATTTGTTGCTTCAACCTCAACCCCCAACGGCTCTGATGATTACGTCGTCGTCGTCGACCCTACCAACTTGGCTTCCATTAACAACACCGACGACGACGACCATGACAACCACCACCACGACTTTCTCTGATAAACTGTGCGAGTGGAATAATCTCATTCCTGGAGAGCCAAGTAATAACAGAGAGTACAGCAATATGTCCTTCAAGTAA 1056 0.4564 MTTAATTAKLDDGHELDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAPKGIRTSWIMNEYRLPHHDTERYQKAEISLCRVYKRPGVEDYPSIPRCLPTRPSPSSRASSHSSDKSISKLTNDVEFVGQMTMMNNYNLQLGKTSSDNNQGVSIALGLSKVQCNPAPSYPNSSASTMAPPFPLIEDEELLMLTNMQPLIMKQTQAPSSSFFLSPPGNNNHNNNSSSASSSNVEDLNRLLSYNQLQQYFNSNNAAPSHHQQQQQQFSNLLLQPQPPTALMITSSSSTLPTWLPLTTPTTTTMTTTTTTFSDKLCEWNNLIPGEPSNNREYSNMSFK 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1288 351 Gene3D NAC domain 28 66 IPR036093 GO:0003677|GO:0006355
Lele35g1288 351 Gene3D NAC domain 67 105 IPR036093 GO:0003677|GO:0006355
Lele35g1288 351 SUPERFAMILY NAC domain 19 102 IPR036093 GO:0003677|GO:0006355
Lele35g1288 351 MobiDBLite consensus disorder prediction 223 248 - -
Lele35g1288 351 ProSiteProfiles NAC domain profile. 19 180 IPR003441 GO:0003677|GO:0006355
Lele35g1288 351 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 65 - -
Lele35g1288 351 MobiDBLite consensus disorder prediction 110 134 - -
Lele35g1288 351 MobiDBLite consensus disorder prediction 117 134 - -
Lele35g1288 351 Pfam No apical meristem (NAM) protein 21 67 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1288 Lele-ChrLele35 18953640 18956092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1288 18 70 NAC Transcription Factor Family AT2G02450 92.453 6.38e-29 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele35g1288 NAM 3.9e-11 No_clan